Pyrgilauda ruficollis (rufous-necked snowfinch): 121362498
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Entry
121362498 CDS
T07608
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pruf03000
]
121362498 (RC3H2)
04121 Ubiquitin system [BR:
pruf04121
]
121362498 (RC3H2)
Transcription factors [BR:
pruf03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
121362498 (RC3H2)
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121362498 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phosducin
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
MRC1
Prok-RING_4
Xin
FtsX_ECD
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
121362498
NCBI-ProteinID:
XP_041339998
LinkDB
All DBs
Position
Unknown
AA seq
1436 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSTNGIANLEPGVPQLIPRCADTSLRALDNTKKGGKTGANGQNASGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPAPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSA
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYPEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQEDQLLNGTTVENGHLLKQHQKESMEQKRQSLGLGRSLSLKDWEGIQSIMTTA
DDKLLGEKLQYYYSSSEGEDEDSEKEDKEGESSIPECVGEVELSSDGSAVNTGPKGVIND
WRRFKQLETEQRQEQRREMERLIKKLSMTCRSHLDDEADQQKQKELQEKINGKMTLQEYS
MIHNDEDDEEFLQRYRKQRMEEMRQQLYSGQQFKQVFEITSGEAFLDTVDKEHKSTLIMI
HIYEDDIPGTESLNGCMICLAAEYPTVKFCRVKSSLIGASTRFTNNALPALLVYKAGELI
GNFVRITDQLGEDFFAVDLEAFLQECGLLPEKDLLLLTSIHNPSACYSEDSDLEID
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaatgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacaccgtgtgcaagacc
tgcctgaacaagctccatcgcaaggcatgtccttttgaccagactgccatcaacaccgac
atcgatgtgctccctgtgaactttgcactcctccagctggttggagcccaggtacctgat
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtcccatgcagaggaagcttgtgacactggtgaattgt
cagctggtggaggaggagggtcgggtcagagccatgagggcagctcggtcgctgggagag
agaactgtcacagaactcatcctgcagcaccaaaatcctcagcaactttctgccaatctt
tgggctgctgtcagggcacgagggtgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtgcaaaggctggaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcagcttaaagaagagttccggagttacgaggctttgcggagagagcac
gatgcccaaattgttcacattgccatggaagcaggacttagaatatcaccagaacagtgg
tcttcccttctttatggagacctggcacataaatcacacatgcaatccattattgacaag
cttcaatctccagaatcttttgctaagagtgtacaagaattgacaattgtcttgcagcgc
acgggggatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggtggct
gtaaagactgtggtccatgggctggtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaaggggggtgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaatatcgcttgaggaacaaaaaaatcagcgcaacagtgagaacattccccctgcta
aacaaagttggcgtaaacagcaccgtctcaaccaccacgggaaacgtgatctctgtcata
ggaagccctgaggcaacgggcaagatggtgccaagtactaatggaatagctaatctagaa
cctggggttccccagctgatcccccgctgtgcagacacctccctgagagctctggacaac
accaagaagggagggaagactggagccaatggccagaacgcttctgggtcccccacagaa
tcacttcctgaaaataaaatcggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagtcaattctgtgcctccaaaatccagc
ccatttgttcccagagtacctgtctaccctccacattctgataacgttcaatatttccaa
gatcccaggactcagctgtcatatgaagttccacagtacccacagacagggtattatcca
gcacctccaacagtaccagctggtgtggctccctgtgttcctcgcttcgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagcaca
ttcccccctcgagatcgactgaattctccctaccagcctcctcctccgcagccctatgga
ccagtccctcctgtcccctctggaatgtacgctccagtctatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatatcattaggagcaattctttacctcccatggat
gtgatgcactcttctgtctatcagacatcattgcgggagaggtacaactctctggatggg
tattactctgtggcttgtcaacctccaaacgagcagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagactggttatgatgagcagctgaggcggaagccagagcaatgg
gcacagtaccacacacagaaaactcctctggtatcgtcaacccttcctatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattccaatgccgtgttaatggatttggacagtggggacgttaaaaggagagtgcat
ttatttgaaacgcagagaagggcaaaggaggaagatccgataatcccgttcagcgacgga
cccatcatctccaagtggggtgcaatctccaggtcatcccgcacaggttatcacacaaca
gatccaatccaggccactgcttcccaaggaagtgctactaagcccatcagtgtatcagat
tatgtcccttatgtcaatgctgtagactcaagatggagtgcctatggctcagattctgct
tcctcagcacgttatgcggaacgggacaggttcatagttacagatttgtctggtcacaga
aagcattccagcactggagatctactgagtattgaattacaacaggccaaaagcaactcc
ttactccttcagagagaggcaaacgcacttgccatgcagcagaagtggaattctctagat
gaaggcagtcgtcttaccttaaaccttttaagcaaggaaattgatttgaggaatggtgag
actgattatcctgaagactgtgcagacacaaagccagaccgagacattgaattggagctg
tcagccctcgacacagacgaacctgatgggcagggggaacagatagaagagattctggac
atacagctagggattagctcccaagaggatcagctgctcaatggaacaaccgtggagaac
gggcatctgctaaagcagcaccagaaagaatctatggaacagaagagacaaagtttaggt
cttggtagaagcttgtctctgaaagactgggaaggaatacagagcataatgactactgcg
gatgataaactgcttggtgagaagctgcagtattattacagcagcagtgagggtgaggat
gaagacagtgagaaggaggataaagaaggggagagcagcattcctgaatgtgtaggcgag
gtggagctcagcagcgatggcagcgctgtcaacacaggtcccaagggagtgatcaatgac
tggcgaaggtttaagcagctggagacggagcagcggcaggagcagcgcagggagatggag
aggctcattaagaagctgtccatgacctgcaggtctcacttggatgacgaggctgatcag
cagaagcagaaggagcttcaggaaaaaatcaatggaaagatgactttacaggaatacagc
atgatccacaatgatgaggatgatgaggaattcctgcagcgctacaggaagcagcggatg
gaggagatgaggcagcagttgtacagtgggcagcagttcaagcaggtgtttgagatcacc
agtggggaagcatttctggacactgtggacaaagagcataagagcacactgatcatgatc
catatttatgaagatgatatccctggcactgaatccctgaatggctgcatgatctgcctg
gctgctgagtacccaacagtgaaattctgcagagtgaagagttccctcattggtgccagc
actcgcttcactaacaatgccctgccagccctgctggtctacaaggcaggggagctcatt
ggcaatttcgtgcgcatcactgaccagcttggagaagatttttttgctgtagacctggag
gcttttctgcaggaatgtggtttgctgccagaaaaagacctactgctcctgacttctata
cataatccatctgcatgttacagtgaagacagtgatctggaaatagactga
DBGET
integrated database retrieval system
