Pyrgilauda ruficollis (rufous-necked snowfinch): 121362977
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Entry
121362977 CDS
T07608
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pruf03016
]
121362977
Enzymes [BR:
pruf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
121362977
Transfer RNA biogenesis [BR:
pruf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121362977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Adaptin_binding
Hydrolase
Motif
Other DBs
NCBI-GeneID:
121362977
NCBI-ProteinID:
XP_041340867
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MDMWSYFHTCLVSIWLHRFYIYSAIAFGISLWIVIHFTTTRTKRKGEKSHEKSSSPEGTS
DKMGNGCAPRQVQRVHVAGVKIFYGSQTGTAKRFAKALAEAVTSLNLPVEVINMGDYDPE
DGLVEETSSRNICVFLVATYTEGQPPESAAWFCKWLEEAANDFRVGKSFLQGLRYAVFGL
GNSDYVDHYNTVGRRMDRWLWMLSASRIMARAEGDSNVARSKHGSIEADFEAWKTKFLIR
LQALCRGEKKPCRGKCKKGKCKSSGKQSKESWDHDHGTSEQDNTEAEELFETSSEEETGS
TDSVIDVEDLGNIMGRMKKAKREQELQEGAAGAERREMITPALREALTKQGYKLIGSHSG
VKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGTEWRW
KMDQPEVILQEALEKHQNMIRQFKGVSGVKAARLEEALAVKHCALSLVGEPIMYPHINHF
VRLLHQHGISTFLVTNAQFPDEIRRLEPVTQLYVSVDASTKESLRRIDRPLFKDFWQRFL
DSLKALAEKQQRTVYRLTLVKAWNVDELKAYADLISLGKPDFIEVKGVTYCGESSASSLT
MANVPWHGEVVSFVQELARLLPEYGIACEHEHSNCLLLAHSKFQVDGEWRTWIDYGRFQE
LVREHERSGGSRTFTAAEYTARTPPWALFGARERGFDPLDVRFQRKNKARDTSGC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtggagctacttccatacttgcctggtgtccatatggctgcacagattttac
atctattctgctattgcttttgggatcagcctttggattgtcattcatttcaccaccacc
agaaccaaaaggaagggtgagaaatcccatgagaaatcctcttcccccgagggaacatca
gacaaaatgggaaatggatgtgccccccgtcaggtgcagagggtccatgttgctggagtg
aagattttctatggctctcagactggcacagcaaagagatttgccaaagctctggctgaa
gctgttacttcccttaatttgcctgtggaagtcattaacatgggagactatgatccagaa
gatgggttagtagaggagacaagcagcaggaacatctgtgtgttcctggtggccacctac
accgaggggcagcctccggagagcgcagcctggttctgcaagtggctggaagaggcagcc
aatgacttccgtgttgggaaaagcttcctgcagggcctgagatatgctgtgttcgggctg
gggaactcggactatgtggatcactacaacacagttggaaggaggatggacaggtggctg
tggatgctcagtgccagcaggatcatggctcgggctgagggggacagcaatgtggcccgg
agcaagcacggcagcattgaggctgactttgaggcctggaaaaccaaattcctcattcga
ctccaggcgctctgcagaggggaaaagaagccctgcagggggaagtgcaagaagggaaag
tgcaaatcttcagggaagcagagcaaggaaagctgggaccatgaccatgggacgtcagaa
caggacaatactgaggcagaggaattgtttgaaaccagtagtgaggaggaaactggaagt
acagattccgtcattgatgttgaagatcttggcaatatcatgggccgcatgaagaaagca
aagagagagcaggagctgcaggaaggagctgctggagcagagaggagagagatgatcacc
ccggccctgagggaggcactcactaaacaaggttataaactcattgggagccattctggg
gtgaagctctgccgatggacaaagtcgatgctgcggggccgtgggggctgctacaagcac
accttctatggcattgagagccatcgctgcatggaggccacccccagcctggcctgtgcc
aacaagtgtgtcttctgctggagacaccacacgaaccctgtgggcaccgagtggcggtgg
aagatggaccagcctgaagtgatcctgcaggaggccctcgagaagcaccagaacatgatc
aggcagttcaaaggcgtgtcaggagtgaaggcagctcggctggaggaagctctggcagtg
aagcactgtgccctgtccctggtgggggagcccatcatgtacccacacatcaaccacttc
gtgaggctcctgcaccagcacggcatctccaccttcctggtcaccaatgcccagttccct
gatgagatcaggaggctggagcctgtgacccagctctacgtcagtgtggatgccagcacc
aaggagagcctgaggaggattgacagacccctcttcaaggacttctggcagaggtttcta
gacagcttaaaggccttagctgaaaagcaacagcgcacagtttataggctgaccctggtg
aaagcttggaacgtggatgaactcaaagcttatgctgacctgatatcccttgggaaacca
gacttcattgaggtcaagggtgtgacctactgcggagagagctctgccagcagcctgacc
atggccaacgtgccatggcacggggaggtggtgagctttgtgcaggagctggcgcggctg
ctcccggagtacggcatcgcctgcgagcacgagcactccaactgcctgctgctggcccac
agcaagttccaggtggatggcgagtggaggacctggatcgactacggccgtttccaggag
ctggtcagggagcacgagcgcagcggcggctccaggaccttcacagcagctgagtacaca
gccaggactcctccctgggccctctttggggccagagaacggggattcgaccccttggat
gtgagattccagcggaagaacaaggcacgggacacctcggggtgctga
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