Pyrgilauda ruficollis (rufous-necked snowfinch): 121363756
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Entry
121363756 CDS
T07608
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03022
Basal transcription factors
pruf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121363756
09124 Replication and repair
03420 Nucleotide excision repair
121363756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pruf03021
]
121363756
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121363756
Transcription machinery [BR:
pruf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121363756
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121363756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
C1_2
VWA_3
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
121363756
NCBI-ProteinID:
XP_041342314
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLNEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKSKRAEKMTEL
SGNSKKHVTALKKAVDMNCSGEPSLYNSLNLAMQTLKHMPGHTSREVLVVLSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHIILDESHYKELLMHHVSPPP
ASSTSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSDPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYKGERYCQGCQGEMKDQNVYIC
KVCQNAFCVECDVFVHDALHCCPGCIHEHPAPVSV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgagcccgagcggaccaagcgctgggaaggaggctatgaaagaacgtgggaa
attcttaaggaggacgaatccggctcgttgaaggcaaccatcgaggacattctcttcaag
gcaaagaggaaaagactcaatgagcaccatggacaagttcggcttggaatgatgcgtcac
ctgtacgtggttgttgatggatcaagaacgatggaggaccaagacttaaaaccgaacaga
cttacttgcactctgaagttactggaatattttgttgaagagtactttgaccagaatcct
attagtcagattggcttaattgtaaccaagagtaaaagagcagaaaaaatgacagaactc
tcaggaaactcaaaaaagcatgtaactgctctgaagaaagcagtggatatgaattgcagt
ggagagccgtctctgtataattccctcaatttggccatgcagactttaaagcacatgcca
ggacatacgagcagagaggttttggtggtcctcagcagtctgacaacatgtgatccagcc
aacatctatgatctaattaagtgtttaaaagcagtaaagatcagagtatctgtcatcggc
ctaagtgctgaagttcgagtttgtacagtacttgcccgagaaactggtggaacataccac
attattttggatgaaagtcattataaggaactgctgatgcaccatgtcagtcctccacct
gccagttcaacttctgagtgttcccttattcgaatgggttttcctcagcatactattgct
tctctgtctgatcaagatgcaaagccctcctttagcatggcgcaattggaaaataacagt
gacccaggtcttacactaggtggatatttttgtcctcagtgcagagccaaatactgtgag
cttcctgtggaatgcaaaatctgtggtcttacattagtgtctgcacctcaccttgctcgg
tcttaccatcacttgtttcctttagatgcctttcaggaagttccactggaagaatacaaa
ggggaacggtattgtcaaggctgccagggagaaatgaaagatcaaaatgtgtatatatgc
aaagtgtgtcagaatgcattttgtgtggaatgcgatgtgtttgttcatgatgcgctgcac
tgctgtcctggctgtattcacgagcaccctgctcctgtatctgtatga
DBGET
integrated database retrieval system
