Pyrgilauda ruficollis (rufous-necked snowfinch): 121364490
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Entry
121364490 CDS
T07608
Symbol
SIM2
Name
(RefSeq) single-minded homolog 2 isoform X1
KO
K09100
single-minded
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pruf03000
]
121364490 (SIM2)
Transcription factors [BR:
pruf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121364490 (SIM2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SIM_C
PAS_3
PAS_11
PAS
PAS_9
HLH
PAS_4
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
121364490
NCBI-ProteinID:
XP_041343728
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MKEKSKNAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGL
GDAWGQPSRIGPLDNVAMELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELT
GNSIYEYIHPSDHDEMTAVLTAHQPLHPHLLQEYEIERSFFLRMKCVLAKRNAGLTCSGY
KVIHCSGYLKIRQYMLDMSLYDSCYQIVGLVAVGQSLPPSAITEIKLHSNMFMFRASLDL
KLIFLDSRVTELTGYEPQDLIEKTLYHHVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSK
QGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDIEYKELQLSLDQVTISKSQFSCRNSV
PTSQETRKIVKPKSNKMKAKLRTTPYPPQQYSSFQADKLECSQVGSWRSSPAASAAALQE
QNFHSESSELLYAPPYSLPFSYHYGHFPVDSHVFSGKKQMLPAKFGQAQGAPCEVARFFL
GALQTNGECQWHYANSLVPSSQSPSKSLPEQPVNIIRHNLAQSYEGGCRSEPGEKARPRG
GWGGFVFAV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaaatccaagaacgcggcaaagactagacgggaaaaagaaaatggagaattc
tacgaactggccaaactcctgcccctgccctcggccatcacctcgcagctggacaaggcg
tccatcatccgcctcaccaccagctacctgaaaatgcgagccgtcttccccgaaggtctg
ggcgacgcctggggacagccgagcaggatcggccctttggataacgtggccatggagctc
ggatcccacttgcttcagactttggatggctttgttttcgtcgtggcatccgatggcaaa
ataatgtacatttctgaaacagcatctgtgcaccttggcctgtcccaggtggagctcact
ggaaacagcatttatgagtacatccacccctcagatcatgatgagatgactgctgtcctc
actgcccaccagcctctgcatcctcacctcctgcaagaatatgaaatcgagagatccttt
ttcctgaggatgaagtgtgtcctagccaagaggaatgcaggcctgacctgcagtggctac
aaggtgatccactgcagtggctacttgaagatccgccagtacatgctggatatgtccctg
tacgactcctgttaccaaatcgtggggctggtggccgtggggcaatctttgcctcccagt
gcaatcactgagatcaagctccacagcaacatgtttatgttcagagccagcttggattta
aaactgattttcctcgattccagggtcacggaattaactggatatgaaccccaggatctg
atagagaaaaccctctaccaccatgtccacggctgtgatgttttccacctgcgatacgct
caccacctgttgctggtgaaaggccaagtgaccaccaagtactaccggctgctgtccaag
cagggaggctgggtgtgggtgcagagctacgccaccatcgtgcacaacagccgttcgtca
cggcctcactgcatagtgagtgtcaattatgtccttacagatattgagtacaaggaactt
cagttgtcactggaccaggttaccatttccaagtcacagttttcatgcagaaactcagta
cctacctcgcaggaaacaaggaaaatagtaaaacccaaaagtaataaaatgaaggcaaaa
ctcagaacaacaccttacccgccacagcaatacagttcgttccaagcagacaaactggaa
tgcagccaggtggggagctggcgctccagccccgctgccagcgccgccgcccttcaggaa
cagaacttccattcagagagcagcgaactcctgtacgcccctccctacagcctgcccttc
tcctaccactatggacacttccctgtggattcccacgtcttcagtggcaagaagcaaatg
ctgcctgcaaaattcgggcaggcccaaggggcaccctgcgaggtggcacggttcttcctg
ggcgcgctgcagaccaacggcgagtgccagtggcactatgcaaactccctggttcccagc
agccagtcaccctccaaaagcctccctgagcagccagtgaacatcatcaggcacaacctt
gcacagagttatgaaggtgggtgtcgctctgagccaggagaaaaagctcggccgcgcggt
ggatggggaggatttgtgttcgcggtttga
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