Pyrgilauda ruficollis (rufous-necked snowfinch): 121365889
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Entry
121365889 CDS
T07608
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121365889 (CHD6)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121365889 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
121365889
NCBI-ProteinID:
XP_041346370
LinkDB
All DBs
Position
Unknown
AA seq
2733 aa
AA seq
DB search
MIMKIQKKEKQPPSLKALSLSPMSSAWECKTQDAFASSEEQDEVPDQVTVTATNTGGQCQ
CPKEEPNGATQKRTSTQNGMQDSGGTGVKKKRKKKDLAEQDGGDKAAVEVKPKRRREPKE
PKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPASRSRSKKSSKDTP
VEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLD
FKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGL
AFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFN
PDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQI
PPEIKHMVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD
EMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISR
QMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNR
NCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEE
QVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA
NQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHCPEAPDFQLQAMIQAAGKLV
LIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFC
KPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYR
LITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMD
EEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKW
AKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFN
EKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYK
GDEKIKSFIWDLITPTKDGQNQALQNHSGSLSAPVPRGRKGKKTKNQMLLPEIKNADWLA
TCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLP
DIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQG
VSDGAQDAAERGSVEKEESSGEKLEGLSKQEDIVAAGVGEASEKRDEPAAAQDGSDSDRS
CWPVSSALTARLRRLVTVYQRCNRKELPPRTEMLVPGNHGYWLQDEMFRRASEVDSVNKE
MQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAM
CKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHERLKLC
QPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTGLPG
PETLCCLYQSNSKLYSSPVYSQMDQSCETLENEAESHIKLETMDSTMSQAGGSPLDANCE
TFMSEVRDIISSNYDESSLPDSLVCMMYDEKACPSEQSSLARDSPSRTDVGNSVAKLSEG
KPEGDEDPSSCDADAMREAPFLEGLQVGSDRMDSQNEEAEPSPSTPESNPSQSAPAKLSK
GLEQKGALASPVAGLPEHGTMERVLSVGLYSPSLHNYELKVPPEQRFISLLQEKGLEAKA
GPSQSHSEEDEEEEEDDDNSEAAADAVEGLNGPRTRAVFDPEAHELGGEEQSSGLPTPED
TCPEDVNGERESLGLGEPGAEVREDCGLTEESTQQHSPGQAQSQPFNLPTPLPQGGPRGA
EAPCVTGEPLGRDAEGQTSCTETLHPEPQGIKQEVCENRDDGEKASSNQSQDGPEKYLDE
ESKNSASALPGEIDDLQDARAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHAILKGK
WPSSSQQFEAQSLLTAPAMASSTGSRSSFTESEAPDPTFNNGVLMSRVQKEGFLSPAFAK
DERKHRRPYDFEMERDAKQRSLEQLAAAHVHPPIVLNGWREAAVDLSRGSDGSPGNSSPF
PLNTSMPKLGTMNALQSSLGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRRKN
IEGMDLIFLKERPLPNRLQDVQEDQPQPPQNSPLPDGPVAATSTPQPAPAAGSQEKAVPN
KSLLDWLQQQSDYTLDVPSFGTNFSDKPKQRRQRCKDPNKLDISSLTGEERVPVVHKGTG
RRLGGATAPALKELPRWLDANLEYAVAADWADIVKLSGYLPENKFNRILTEPVLRDTGPR
RRGRRPRNELLKGPGVVADSSSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFPA
GFAAVPSGEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNSPMTTTCTATAPTSLTSTTKG
GTASTEKASEEKQGSQDGKKEPLAENKPGPSSFSNQSESAITTSSPVAFNPFLIPGMSPG
LIYPSMFLSPGIGMALPGIQQTRHSEAANLESQKRKRKKAKGELANPEPETVSLPEKEAA
NSQNCVQQSLPAVAEKEQDGPAEEERQAAHDPD
NT seq
8202 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaaaaaagaaaagcagccgccaagcttaaaagcactgagcctc
tccccaatgtcgtctgcctgggagtgcaagacgcaggacgcctttgccagcagcgaagag
caggacgaggtgcccgaccaggtgacagtgacagccacaaacacaggtggtcagtgccag
tgcccgaaggaggagcccaatggggctacccagaagcggacaagcacccagaacgggatg
caggacagcgggggcacgggggtgaagaagaaacggaagaaaaaggatctggcagagcag
gacgggggagataaagcagctgtggaggtgaaaccaaagaggaggagagagcctaaagaa
ccaaaagaacctaaaaaggtgaaggagtctaagaagccgaaggagcccaagcagagggag
gtggctaagaagccccggaaacctcgggaacccaaagccccgaaggagcctaaagacaag
aagagtggctctgagccagcctccagatcaagatccaagaagagcagcaaagacacccct
gtggagaagaagaagaaagggaagaggaaaaatgagataccagtgaacagtttggatttg
gatcaggatctcctgagcccatctgtacagagcccagaggagtctgcagagtcagctgac
agccagaaacgacgctcaggacggcaggtgaagaggaggaagtacaacgaggacctggat
ttcaaggttgtagatgatgatggcgagacaattgctgtgctgggagctggacgaacctct
gcgctctccgcctctactctggcatggcaggcagaggagcctcctgaggatgatgccaat
atcattgagaagatccttgcctccaggatggtgcagaaggaggctcatcctggaggccta
gcatttgagacagaggagttctacgtcaaatacaggaacttctcctaccttcattgtaaa
tgggcaacgctggaggagctggagaaggaccccaggatctcacagaagataaagcgcttc
cggaacaagcaggctcagatgaaacacatttttacagagcctgatgaggatttgttcaac
cctgactacgtggaggtagatcgaattctggaggtggctcacacaaaggaccctgacact
ggggaggaggtgactcactacttggtgaagtggtgctcactgccctatgaggagagcacc
tgggagctggaggaggatgttgacccagggaagattaaagagtttgaagccctccaaatc
cctccagaaatcaagcacatggtaacgtaccctgaggagcgcccagcgtccgagtcctgg
cagaagctggagaagtcccgggagtacaagaacagcaaccagctgcgggagtatcagctg
gaggggatgaactggctgctctttaactggtataacaggaagaactgcatcctggctgat
gagatggggttggggaagacaatccagtcaatcactttcctctcagagatattcctgatg
ggcatccatggccccttcctcatcatcgcacctctctccaccatcacaaactgggagagg
gagttccgcacctggacggagatgaacgccatcgtgtaccacggcagccagatcagccgg
cagatgatccagcagtacgagatggtgtacagggacacacagggtaaccctctccctggg
atcttcaagttccaggtggttatcaccacctttgagatgatccttgctgactgcccggag
ctgaagaagatccagtggcgctgtgtggttattgatgaggcacatcgcctgaagaacagg
aactgcaaactcctggaggggctgaagctcatggccctggagcacaaggtgctgctaaca
gggacccctctgcagaactcagtagaggagctcttcagcctcctaaattttctggagcca
cagcagttcccctcagagacagccttcctggaagagtttggagacctgaagacagaggag
caggttaagaagctgcagtccatcctgaagcccatgatgctgcgacggctgaaggatgat
gtagagaagaatctggcacccaagcaggagaccatcattgaggtggagctgaccaatatc
cagaagaaatactaccgggctatcctggagaaaaatttctccttcctctctaagggtgcc
aaccagcacaatatgcccaacctcatcaataccatgatggagctgcgcaagtgctgcaat
cacccatacctcatcaatggggcagaggagaagatcctggaagacttccgcaaaacacac
tgcccagaggcaccagacttccagctgcaggcaatgatccaggcagctgggaagctggtg
ctcattgataagctgcttcccaagctgattgctggtgggcacaaggtgctcatcttctcg
cagatggtgcgctgccttgacatcctggaggactatctcatccagagacggtacacctac
gagcgcatcgacgggcgggtgcgcggcaacctgcgccaggctgccatcgaccgcttctgc
aagcccgactcggatcgctttgtatttctgctgtgcacgcgggcaggcgggctgggcatc
aacctgaccgctgctgacacctgtatcatctttgattccgactggaacccacagaatgac
ctgcaggctcaagctcgctgccaccgcatcgggcaaagcaaggccgtgaaggtctatcgc
ctcatcaccaggaactcctatgagcgggagatgttcgacaaggccagcctgaagctgggc
ctggataaagctgtgctgcaggacatcaaccgcaagggcagcaccaatggggttcagcag
ctctccaagatggaggtggaggacctcctgcggaagggtgcctacggcgcactcatggat
gaggaggatgaagggtcaaagttctgtgaggaagacattgatcagatcctccagcgcagg
acacagaccatcacaatccagtctgaaggaaagggctccacatttgcaaaggccagcttt
gtagcatcaggaaacagaactgacatttccttagatgaccccaacttctggcagaagtgg
gccaagatagcagagctcgatacagatgccaagaacgaaaaggagagcctggtcatcgac
agaccccgggtgcggaagcaaaccaaacactacaactccttcgaagaggacgagctgatg
gagttctctgagctggacagtgactcggatgagcgacccacacgctcgcggcgctttaac
gagaagacgcggcggtacctgcgggctgagtgcttccgtgtggagaagaacctgctcata
tttggctggggacgctggaaagatatcctgacccatgggcggttcaagtggcacctgaat
gagaaggacatggagatgatttgtcgggccttgctggtgtattgcgtcaaacactacaag
ggggatgagaagattaagagttttatctgggatctcatcacaccgacgaaggacggccag
aatcaggctctgcagaatcactcaggtagcttgtcagcaccggtgcccagaggcaggaag
gggaagaagacaaagaaccagatgctgcttcctgagataaagaacgcagactggcttgcc
acctgcaaccccgaggtggtgctgcatgatgacagctacaagaagcacctcaaacaacac
tgcaacaaggttctgctgcgggtgcgaatgctctactacctaaaggctgaagtactgggg
gaggctgcggataaagcctttgaggggacccctgccagggagctggatgtgctgctgcca
gacattgactacgtggagatcccagtggactggtggaatgctgaagccgataaatccctg
ctcatcggcgtcttcaagcacggttacgagcggtacaacgccatgcgggcggacccggcg
ctgtgtttcctggagaaggtgggcatgccagatgagaagctgctctctgccgagcagggc
gtcagcgatggggcacaggatgctgccgaaaggggcagcgtggaaaaagaagagagcagt
ggagaaaagctggaggggctgtcaaaacaggaggacatcgtggctgctggggtgggtgaa
gccagtgagaagcgggacgagccagcggcagcccaggatggctccgactcagacagatcc
tgctggcctgtctcctctgctctcacggccagactgcggcgactcgtcaccgtctaccag
cgctgcaaccgcaaggagctgcctccccgcaccgagatgctggtgcctggtaaccatggc
tactggctgcaggatgagatgttccggagagcctctgaggtggactcggttaacaaagaa
atgcagaaaaggtggaccaggagggagcaggcagatttctaccgcactgtctcctccttt
ggggttatctatgaccaagagaaaaaaatctttgactgggcccagttccgagccatctct
cgactggagaagaagacggatgagagcctggagaagtacttctacagctttgtggccatg
tgcaagaatgtctgtggtctccctttgtggaaagaggatggtcctccagaccctgacatc
tacgtggagcccatcacagaggagcgtgctgccaggaccctgtaccgcattgagctgctg
cggaaggtgcgcgaacaggtgctcaagtgcccccagctccacgagcgcctcaagctgtgc
cagcccagcctctacctgcccgtgtggtgggagtgtggcaaacacgaccgggacctgctg
atcggcaccgccaagcacggcctgaaccgcactgactactacatcatgaatgacccccag
ctgtcttttttagatgcatacagaaactatgcccagcataaaagaacagggctcccaggc
ccagaaaccctgtgctgcctttaccagtctaactccaaactctacagttcccccgtgtac
agccagatggaccagtcctgtgaaaccctggagaacgaagccgagagtcacatcaagcta
gaaaccatggacagcaccatgtcccaggctgggggcagcccactggatgcaaactgtgaa
acattcatgtccgaagtccgggacataatttccagtaattacgacgagagctcgctgccg
gactcgctggtgtgcatgatgtacgatgagaaggcctgtcccagcgagcagagctccctc
gccagagacagcccaagccgcacggatgtcggaaacagcgttgccaaactctctgagggc
aagccggagggggatgaggatccatccagctgcgatgcagatgccatgagagaggctccc
ttcctagagggtttgcaggtgggctctgaccgaatggacagtcagaatgaggaagctgag
ccttcaccttctacccccgagagcaatccttcacagagtgccccagccaaactcagcaaa
ggcttggaacagaaaggagcacttgccagcccggtggcagggctgcccgagcatggcact
atggaaagggtcctaagtgtggggctctacagtcccagtctccataactatgaactaaag
gttccccctgagcagaggttcatcagtctgctgcaggagaaaggattggaggcaaaggcg
gggccaagtcagagccacagcgaggaagatgaggaggaagaagaggacgatgataactct
gaggcagcagcagatgctgtggaaggcttgaatggtcccaggaccagggctgtttttgac
cccgaggctcatgaactggggggtgaagagcagagttctggtctccccacacctgaggac
acttgcccagaagatgtaaatggcgagagggagtccctgggtctgggagagcccggggca
gaagtcagggaggactgtggcttgactgaggagagcacccagcagcactcaccaggccag
gctcagagccagcccttcaacctgcccacacctctgcctcagggggggcctcggggggca
gaggccccctgtgtcacgggggagcccttgggccgagatgctgaggggcagacaagctgc
acagagacgctgcaccctgagcctcagggcataaagcaagaagtgtgtgagaacagagat
gatggagagaaagccagcagcaaccagagccaagatggtccagagaagtacttggatgaa
gagagcaagaattctgcttctgccctgcctggggagattgatgatcttcaggatgcccgg
gcaccgaccattgcccagctgctgcaggagaaaacgctttactccttctctgagtggcct
aaggaccgtgtgattatcaaccgcattgacaacatctgccacgccatcctgaagggcaag
tggccttcctccagccagcagtttgaggcacagagcctgctgacagccccagccatggcc
agcagcaccggcagcaggagcagctttaccgagtcagaagctcccgatcccaccttcaat
aatggggtcttaatgtcacgggtacaaaaggaaggtttcctgagccctgcctttgcaaaa
gatgaacggaagcacaggagaccctatgacttcgagatggaaagagatgccaagcagagg
agcctggagcagctggcagcagcccatgtccatccacccattgtgctgaacggctggcgc
gaggcagcggtggacttgtccagaggctctgatgggtccccagggaattcctctcctttc
cccctgaacacaagcatgcccaaactggggaccatgaatgcccttcagagctccctgggc
atggacttgtctggcatcctacaggcagggttaatccatcctgtcactggacagattgta
aatggcagcctccgaagagatgatgctgccatgaggaggagacggggcaggaggaaaaat
attgaagggatggacctcatcttcttgaaggagaggcctcttccaaacaggctgcaggat
gttcaggaagaccagccgcagccccctcagaacagtccccttcctgatgggccggttgct
gctacctcaactccacagccagccccagctgcaggcagccaagagaaggctgtcccgaat
aagagtctccttgactggctccagcagcagtctgactacacactcgatgtccccagcttt
ggcacaaatttttcagacaagcccaagcagaggaggcagcgctgcaaggaccccaacaaa
ctggacattagctctctgacgggagaggagcgggtgccggtggtacataagggtaccgga
cggcggttagggggagccacggcaccagcattgaaggaattgccaaggtggcttgatgca
aacttggagtatgctgttgcagctgactgggctgacattgttaagctttcaggttactta
cccgaaaacaaattcaatcgcatcctcaccgagcctgtgctccgggacaccgggccgcgc
cggagagggaggaggccccggaatgagctccttaaaggccctggtgtcgtagcagattct
tcttctggaatgggaccactgttcatgaacggactaattgcagggatggatctagtggga
cttcagaacatgagaaatatgcaagggatccctctgaccgggctggtggggtttcctgct
ggctttgcggcagtgccctcgggtgaggatgtgaagagcaccctgagcatgttgcccatg
atgctcccgggcatggcgaccgttccccagatgtttggcgtgggaggactcctcaactcc
ccgatgacgacaacttgcaccgcgactgctccgacttcgttaacaagcacaacgaaaggt
ggcacagccagcaccgagaaagccagtgaggagaaacagggcagccaggatgggaaaaag
gaacctctcgctgaaaataagcctggtcctagttcattttctaatcagtcagaatctgca
ataactaccagtagtcctgtagcttttaacccatttcttatcccagggatgtctcctgga
ctgatctatccctccatgttcctttcccctggcattggcatggcgctgcctggcatccag
caaaccaggcactcagaggcggcgaacctggagagccagaagcggaagaggaagaaagcg
aaaggggaattggcaaatccagagccagaaactgtctcactgccggaaaaagaagctgca
aacagtcaaaactgtgtgcagcagagcctgccagccgtggcagagaaggagcaggacgga
ccagcagaggaggagcgccaagcagctcacgatcccgattag
DBGET
integrated database retrieval system
