Propioniciclava coleopterorum: G7070_04805
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Entry
G7070_04805 CDS
T06483
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
prv
Propioniciclava coleopterorum
Pathway
prv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
prv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
G7070_04805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prv03400
]
G7070_04805
Enzymes [BR:
prv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
G7070_04805
DNA repair and recombination proteins [BR:
prv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
G7070_04805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
QIK71718
UniProt:
A0A6G7Y502
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Position
complement(981853..984036)
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AA seq
727 aa
AA seq
DB search
MPAADARMLEVDGPDGPRTVKLSSPDKVLWPATDAGPAVTKADLADYLLAVAEPFLHLNG
DRPMTLQRFPEGIEGEEFFSKRPPRGAPSFLRTVTCTYPSRRRHDQLVFDEPASLAWAAQ
MGTITFHPWPVRTANLDNPDEFRIDLDPQPGRDFRDAVEAAFALREVMAEVGLTAYAKTS
GNRGIHVYARITPDHEFQDVRHGVIGVARELERRLPDLVTSSWWKEERGERVFVDFNQAN
RDRTIAGAYSPRPLPWAPVSTPLTWDELREADPTTLTVRTVPALLAERGHPWADIDEHVG
SLDGALKLWDADLGRGLGELNFPPDYPKMPNEPPRVPPSKRKADRPTEEYLAPKAERDAE
WHMPIVPPFGPMLAKLVKEFPKADVLFEPKWDGFRTIIWRSGDQVELGSRNTRPMTRYFP
ELVEAVKANFPDPACIDGEIIMIDPESGDRLNFDLLQQRIHPAASRIKKLSESCPASFVA
FDLLALRDTNVAEKPFKERRALLEEALADAEPPIHLTRATHDRELAREWFTRFEGAGLDG
VIAKPLDAPYAEDKRVMYKIKHERTADCVVAGYRLYRDEPDAIGSLLLGLFTAEGNLNSV
GVIGAFPMARRRELFEELQPLVTGFEGHPWSWAAPADDLPDNRDQSFPRTPTAAAHSRWN
AKKDLSFTPLRPERVVEVRYEHMEGERFRHTAQFSRWRPDRTPESCTYEQLEEPVSYDLA
DVLGTAD
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgcagacgcacggatgctcgaggtcgacggccccgacggcccccgcacggtc
aagctgtccagccccgacaaggtgctctggccggccacggacgcgggacccgcggtcacc
aaggccgacctggccgactacctgctcgcggtcgccgaaccgttcctgcacctgaacggc
gaccggcccatgacgctgcagcggttccccgaggggatcgagggcgaggagttcttctcg
aagcggcctccgcgcggggcgccgtccttcctgcgcaccgtcacctgcacctacccctcc
cgccgccggcacgaccagttggtgttcgacgagccggcctcgctggcgtgggcggcccag
atgggcacgatcacgttccacccgtggccggtccggaccgcgaacctcgacaaccccgac
gagttccgcatcgacctggacccccagcccggacgcgacttccgcgacgcggtcgaggcc
gcgttcgcgctgcgcgaggtgatggccgaggtcgggctgacggcgtacgccaagacgtcg
ggcaaccgcggcatccacgtgtacgcccggatcacgcccgaccacgagttccaggacgtc
cggcacggcgtgatcggggtcgcgcgcgagctggagcgtcggctgcccgacctggtcacc
agcagttggtggaaggaggagcgcggggagcgggtcttcgtcgacttcaaccaggccaac
cgcgaccgcaccatcgccggggcctactcgccgcgtccgctgccgtgggcgcccgtctcc
acaccgctcacctgggacgaactgcgcgaggccgaccccacgaccctgaccgtgcgcacc
gtgcccgcgctgctcgccgagcgcgggcacccctgggccgacatcgacgagcacgtcggg
agtctggacggcgcgctcaagctctgggacgccgacctcgggcgcgggctgggcgagctg
aacttcccgcccgactaccccaagatgccgaacgagccgccccgggtcccgccgagcaag
cgcaaggccgaccggcccaccgaggagtacctggcgcccaaggccgagcgggacgccgaa
tggcacatgccgatcgtgccgccgttcgggccgatgctggccaagctggtcaaggagttc
ccgaaggccgacgtgctgttcgagcccaagtgggacggcttccgcacgatcatctggcgc
tcgggcgaccaggtggagctgggcagccgcaacacccggccgatgacccgctacttcccc
gagctcgtcgaggcggtgaaggccaacttccccgacccggcctgcatcgacggggagatc
atcatgatcgaccccgagtccggcgaccggctcaacttcgacctgttgcagcagcggatc
caccccgcggcgtcccggatcaagaagctcagcgagtcctgccccgccagcttcgtcgcc
ttcgacctgctggcgctgcgcgacaccaacgtggcggagaagccgttcaaggagcgccgc
gccctgctcgaggaggcgctcgccgacgccgagccgcccatccacctcacccgcgccacc
cacgaccgcgagctggcccgggagtggttcacccggttcgagggcgccggcctggacggc
gtcatcgccaagccgctggacgcgccctacgccgaggacaagcgcgtcatgtacaagatc
aagcacgagcggacggccgactgcgtggtggccggctaccggctctaccgcgacgagccg
gacgcgatcggctcgctgctgctcggcctgttcaccgcggaggggaacctcaactcggtc
ggcgtgatcggcgcgttcccgatggcgcggcgcagggagctcttcgaggagctgcagccg
ctggtcaccggcttcgagggccacccgtggagctgggcggcccccgccgacgacctgccc
gacaaccgcgatcagtcgttcccccggacgccgaccgccgccgcgcactcgcgctggaac
gccaagaaggacctctcgttcacgccgctgcgtcccgagcgggtggtggaggtgcgctac
gagcacatggagggcgagcgcttccggcacaccgcccagttctcgcggtggcgccccgac
cggacgcccgagtcgtgcacctacgagcagttggaggagcccgtcagctacgacctggcc
gacgtgctcggcacggcggactga
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