KEGG   Propioniciclava coleopterorum: G7070_04805
Entry
G7070_04805       CDS       T06483                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
prv  Propioniciclava coleopterorum
Pathway
prv03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:prv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    G7070_04805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prv03400]
    G7070_04805
Enzymes [BR:prv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     G7070_04805
DNA repair and recombination proteins [BR:prv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     G7070_04805
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S
Other DBs
NCBI-ProteinID: QIK71718
UniProt: A0A6G7Y502
LinkDB
Position
complement(981853..984036)
AA seq 727 aa
MPAADARMLEVDGPDGPRTVKLSSPDKVLWPATDAGPAVTKADLADYLLAVAEPFLHLNG
DRPMTLQRFPEGIEGEEFFSKRPPRGAPSFLRTVTCTYPSRRRHDQLVFDEPASLAWAAQ
MGTITFHPWPVRTANLDNPDEFRIDLDPQPGRDFRDAVEAAFALREVMAEVGLTAYAKTS
GNRGIHVYARITPDHEFQDVRHGVIGVARELERRLPDLVTSSWWKEERGERVFVDFNQAN
RDRTIAGAYSPRPLPWAPVSTPLTWDELREADPTTLTVRTVPALLAERGHPWADIDEHVG
SLDGALKLWDADLGRGLGELNFPPDYPKMPNEPPRVPPSKRKADRPTEEYLAPKAERDAE
WHMPIVPPFGPMLAKLVKEFPKADVLFEPKWDGFRTIIWRSGDQVELGSRNTRPMTRYFP
ELVEAVKANFPDPACIDGEIIMIDPESGDRLNFDLLQQRIHPAASRIKKLSESCPASFVA
FDLLALRDTNVAEKPFKERRALLEEALADAEPPIHLTRATHDRELAREWFTRFEGAGLDG
VIAKPLDAPYAEDKRVMYKIKHERTADCVVAGYRLYRDEPDAIGSLLLGLFTAEGNLNSV
GVIGAFPMARRRELFEELQPLVTGFEGHPWSWAAPADDLPDNRDQSFPRTPTAAAHSRWN
AKKDLSFTPLRPERVVEVRYEHMEGERFRHTAQFSRWRPDRTPESCTYEQLEEPVSYDLA
DVLGTAD
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgcctgccgcagacgcacggatgctcgaggtcgacggccccgacggcccccgcacggtc
aagctgtccagccccgacaaggtgctctggccggccacggacgcgggacccgcggtcacc
aaggccgacctggccgactacctgctcgcggtcgccgaaccgttcctgcacctgaacggc
gaccggcccatgacgctgcagcggttccccgaggggatcgagggcgaggagttcttctcg
aagcggcctccgcgcggggcgccgtccttcctgcgcaccgtcacctgcacctacccctcc
cgccgccggcacgaccagttggtgttcgacgagccggcctcgctggcgtgggcggcccag
atgggcacgatcacgttccacccgtggccggtccggaccgcgaacctcgacaaccccgac
gagttccgcatcgacctggacccccagcccggacgcgacttccgcgacgcggtcgaggcc
gcgttcgcgctgcgcgaggtgatggccgaggtcgggctgacggcgtacgccaagacgtcg
ggcaaccgcggcatccacgtgtacgcccggatcacgcccgaccacgagttccaggacgtc
cggcacggcgtgatcggggtcgcgcgcgagctggagcgtcggctgcccgacctggtcacc
agcagttggtggaaggaggagcgcggggagcgggtcttcgtcgacttcaaccaggccaac
cgcgaccgcaccatcgccggggcctactcgccgcgtccgctgccgtgggcgcccgtctcc
acaccgctcacctgggacgaactgcgcgaggccgaccccacgaccctgaccgtgcgcacc
gtgcccgcgctgctcgccgagcgcgggcacccctgggccgacatcgacgagcacgtcggg
agtctggacggcgcgctcaagctctgggacgccgacctcgggcgcgggctgggcgagctg
aacttcccgcccgactaccccaagatgccgaacgagccgccccgggtcccgccgagcaag
cgcaaggccgaccggcccaccgaggagtacctggcgcccaaggccgagcgggacgccgaa
tggcacatgccgatcgtgccgccgttcgggccgatgctggccaagctggtcaaggagttc
ccgaaggccgacgtgctgttcgagcccaagtgggacggcttccgcacgatcatctggcgc
tcgggcgaccaggtggagctgggcagccgcaacacccggccgatgacccgctacttcccc
gagctcgtcgaggcggtgaaggccaacttccccgacccggcctgcatcgacggggagatc
atcatgatcgaccccgagtccggcgaccggctcaacttcgacctgttgcagcagcggatc
caccccgcggcgtcccggatcaagaagctcagcgagtcctgccccgccagcttcgtcgcc
ttcgacctgctggcgctgcgcgacaccaacgtggcggagaagccgttcaaggagcgccgc
gccctgctcgaggaggcgctcgccgacgccgagccgcccatccacctcacccgcgccacc
cacgaccgcgagctggcccgggagtggttcacccggttcgagggcgccggcctggacggc
gtcatcgccaagccgctggacgcgccctacgccgaggacaagcgcgtcatgtacaagatc
aagcacgagcggacggccgactgcgtggtggccggctaccggctctaccgcgacgagccg
gacgcgatcggctcgctgctgctcggcctgttcaccgcggaggggaacctcaactcggtc
ggcgtgatcggcgcgttcccgatggcgcggcgcagggagctcttcgaggagctgcagccg
ctggtcaccggcttcgagggccacccgtggagctgggcggcccccgccgacgacctgccc
gacaaccgcgatcagtcgttcccccggacgccgaccgccgccgcgcactcgcgctggaac
gccaagaaggacctctcgttcacgccgctgcgtcccgagcgggtggtggaggtgcgctac
gagcacatggagggcgagcgcttccggcacaccgcccagttctcgcggtggcgccccgac
cggacgcccgagtcgtgcacctacgagcagttggaggagcccgtcagctacgacctggcc
gacgtgctcggcacggcggactga

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