Pseudomonas rhodesiae: HRH33_15645
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Entry
HRH33_15645 CDS
T07097
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
prx
Pseudomonas rhodesiae
Pathway
prx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HRH33_15645 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prx03400
]
HRH33_15645 (uvrA)
DNA repair and recombination proteins [BR:
prx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HRH33_15645 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HRH33_15645 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_21
nSTAND1
AAA_29
DnaJ_CXXCXGXG
AAA_16
AAA_25
DUF4350
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
QKJ73947
LinkDB
All DBs
Position
complement(3489141..3491660)
Genome browser
AA seq
839 aa
AA seq
DB search
MTSQRNLPPLTAQAAGFVRVRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFSTVY
AEAQRRYFESVAPYARRLIDQVGVPDVDSIEGLPPAVALQQQRGTPSARSSVGSVTTLSS
LIRMLYSRAGQYPAGQAMLYAEDFSPNLPQGACPQCHGLGRVYEVTEALMVPDPSLSIRQ
RAVASWPLAWQGQNLRDILVTLGYDVDIPWRDLPKKQRDWILFTEETPTVPVYAGFTPEQ
TREALKRKLEPSYQGTFSGARRYILHTFSHTQSALMKKRVSQFMQGSPCPLCEGKRLTRA
ALSVKFAGVDIGELSQLSLTQLAELLRPVAAGEDRMKLSVEKRLAAQRIAEDLLERVNTL
IELGLGYLSLERSTPTLSSGELQRLRLATQLGSQLFGVIYVLDEPSAGLHPADGEALFTA
LERLKAAGNSLFVVEHDLETMRRADWLIDVGPAAGEQGGQVLYSGPPAGLAEVQASQTRE
YLFAAPRPATAARREPSAWLTLEGVTRNNLKELQVDFPLGCFTAVTGVSGSGKSSLVSQA
LLELVGSGLGRVVETDDEPSLEDDAPQASGGRIGAGLEHIRRLVQVDQKPIGRTPRSNLA
TYTGLFDNVRKLFAATPAAKKRGYDAGQFSFNVAKGRCPNCEGEGFVSVELLFMPSVYAP
CPTCHGARYNPETLAVKWQGMNIAQVLGLTVNQAVEVFAEQPGVLRSLEVLRDIGLGYLR
LGQPATELSGGEAQRIKLATELQRNARGATLYVLDEPTTGLHPRDVDRLLSQLNQLVDAG
HTVVVVEHEMRVVAQSDWVIDIGPGAGDLGGNVVACGTPQKVAKSKKSRTAPFLAKAMI
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgacctcacaacgcaacctcccgccgctcacggcccaggccgctggctttgtgcgcgtg
cgcggcgctcgcgaacacaacttgcgcaacgtcgatgtggacatcccgcgcgatgccctg
gtggtgttcactggcgtgtccggctcgggcaaatcgtccctggcgttttctacggtgtat
gccgaggctcagcgtcgctatttcgaatcggtggcgccgtatgcgcggcgcttgatcgat
caggtgggcgtgccggatgtggacagcatcgaaggcctgccgccggcggtggccctgcaa
cagcagcgcggcacgccgagcgcgcgctcatcggtgggcagcgtgaccaccttgtcgagc
ctgattcgcatgctgtactcccgcgccggtcaatacccggcagggcaggccatgctgtat
gccgaggatttctcgccgaacctgccccagggcgcgtgcccgcagtgccatgggctgggc
cgcgtatatgaggtgacggaggcgctgatggtgcccgatccgtccctgagcatccgccag
cgcgcggtggcgtcctggccgttggcgtggcagggccagaacctgcgcgacatcctggtg
acgctgggctatgacgtggatatcccgtggcgcgacctgccgaaaaaacagcgcgattgg
attctcttcaccgaagaaaccccgacggtgccggtgtatgccggtttcaccccggagcag
acccgcgaggcgctcaagcgcaagttggaacccagttaccaaggcacgttcagcggtgcg
cggcgctatatcctgcacaccttcagccacactcagagcgcgctgatgaaaaagcgcgtc
tcgcagtttatgcagggcagcccttgcccgctgtgcgagggcaaacgcctgacccgagcg
gcgttgtcggtgaaatttgccggggtggacatcggcgagttgtcccagctgtcgttgacg
cagctggccgagttgctgcgaccggtggcggcgggcgaagaccgcatgaaactgtcggtg
gaaaagcgtctggcggcgcagcgtattgctgaggacctgctggaacgcgttaatacgctg
atcgaactgggtttgggctacctgtccctggaacgcagcacgccgactttgtcgtcaggc
gaattgcagcgtttgcgcctggccactcagttgggctcgcaattgtttggggtgatttat
gtgttggacgaaccatcggccggcctgcatccggccgatggcgaagccttgtttaccgcg
ctggagcggttgaaggcggcgggcaattcgttgtttgtagtcgagcacgacctggaaacc
atgcgccgcgccgattggctgatcgacgtcggcccggctgccggcgagcagggtgggcaa
gtgctgtacagcgggccgcccgccggcctggccgaggtgcaggcgtcgcagacccgcgag
tacctgttcgccgcaccgcgcccggccactgccgcgcgtcgtgagcccagcgcctggctg
acgctggagggcgtaacgcgcaataacctcaaagagttgcaggtggattttccgctgggc
tgctttaccgccgtcaccggggtttccggttcaggcaagtccagcctggtcagccaggcg
ctgctcgaactggtgggcagtggccttgggcgcgtggtggaaactgacgacgaaccaagc
ctggaagatgacgcgccgcaagccagcggcggacgtatcggcgctgggctggaacatatc
cggcgtttggtgcaggtggatcagaaacccatcggccgcacgccgcgttccaatctggca
acctacaccgggctgttcgacaacgtgcgcaaactgtttgccgccacgccagcagcgaag
aagcgcggctacgatgccgggcaattctcgttcaacgtcgccaagggccgctgccccaac
tgcgagggcgagggctttgtcagcgtcgagttgctgtttatgcccagcgtctacgcaccg
tgcccaacctgccatggcgcgcgctacaaccccgaaaccctggcggtgaagtggcaaggc
atgaacatcgcccaggtgctggggctgacggtgaaccaggcggtggaggtgtttgccgaa
cagccgggcgtgctgcgttcgctggaggtgttgcgggatatcggcctgggttacctgcgc
cttggccaaccggcgacggagctgtccggcggcgaagcgcagcgcatcaaattggccacc
gagctgcaacgcaatgcccgtggcgccaccttgtatgtattggatgaacccaccaccggc
ctgcacccacgggacgtcgaccgcttgctcagccagctcaatcaactggtggacgcgggg
cacacggtggttgtggtggaacatgaaatgcgcgtggtggcccagagcgactgggtgatc
gatatcggcccgggagccggtgatctgggcggcaacgtagtggcctgcggcacgccgcag
aaggtggccaaaagcaaaaagagccggactgcgccgttccttgccaaggcgatgatctaa
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