Paraburkholderia sabiae: QEN71_13965
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Entry
QEN71_13965 CDS
T09203
Name
(GenBank) discoidin domain-containing protein
Organism
psaa
Paraburkholderia sabiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F5_F8_type_C
Ig_3
I-set
Ig_2
Glyco_hydro2_C5
Glyco_hydro_2
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2_N
BetaGal_ABD2
DUF1566
ig
Motif
Other DBs
NCBI-ProteinID:
WJZ76852
LinkDB
All DBs
Position
1:complement(3114702..3120293)
Genome browser
AA seq
1863 aa
AA seq
DB search
MMLLCSATHAVASEALPPSNHIRINLGATPWKYIKDADDANSMQPGFNDSAWSSVGVPQT
PSDNDTFLNWKSGGDQGYLSGNINWYRKHFSLDPSYANRKIYIEFEGAHTGAQVYINGTL
LRGNSQINRDATHVLGFIPFIVDITNYVKFDGTDNVLAVKVARGDKFFESPNFAGAFRFG
QDDTGLFRPVWMHITDRVHIPENIYAVLNTWGTYVATVAASTSSATIRVQTNVLNEYSTD
KKVTLTTQIVDAGGNVVANAQDTRTVTANLSPDLHPSLFDQVLTVANPNLWYPNNSIYGK
PYLYHVIHTVSIDGVVVDTAESPLGIRTITWDQNFPIINGHPHYLWGASGRYDYPALGSA
VPAELQWKDLSLLAQAGGSLYRPGHSSQGREFLDAADAYGVMMVQPSGEGEGGFGIICNA
QTDPKVACMTQNNVTLKTELHRDMIVHDRNHPSVLAWEADNGTTDTAFAQSLKTVSQMWD
PINTRAQADRTPNPNNGDILGCSGNGCDINVKKDFPNSPAWGSEYWGDGVGRWKYDFELA
FAVKYLKEWVASVAGKSFGIAHWYLADTPGETNTQTDGIDPDSVRGNGASMMDANRLPRL
IYYIYQAVWTPFEIKPVVKLAHTWNRSGSVTVNAFSNCPAVRLRLNGELVGGDQAPNPTS
SDPSADMTQNTTLLPGQVHWDNVKWAPGTLTAECLDNNRQVAASDSLVTAGPADHILLTV
EPELVKPNGESFALTANGTDAAIITATVVDAINVRVPDASQTLTFAVSGPGTYRGGSDHD
VTPNQPLSYHAPGDPNLSVEGGMTRIAVKTQFAPGTVTVTATSPGLGSGTTSFNVVPTAD
QQVFNGNGLVVGPQPPSALRIVTQPADQIVTQGQSGQFSVLSAGAAPIAYQWMKNGAAIP
GATGYAYMTPAVASGDNGATYSVAVTNANSSVTSRTASLTVVQPAAPTIVTQPLSLSITS
GQSAEFSVVAAGSPVLSYQWTKNGESVPGANQPVYDTPATQTSDSGSVYRAVVTNSAGTV
TSQDATLTVSVATPPVIVSQPHSQSVPFGQSVTFNVLASGSTPLKYQWTKDGKPYGTNAA
SIAIVSAQGSDAGDYAVTISNSAGSITSDHVTLTVSGADNSNLALGAKATSSSDQNGGLT
AQNAIDGSVASRWSSAPQIDPSWITVDLGSIQTFNKVVLMWENAAASAYKIQVSNDNGQW
TNVLPNDQVIAGHGGTETTVFPSTSARYVRMLGLQRTTQYGYSLFEFQVFDAPQCGSEAE
RFTLLGAKPGTWNSTIAGLPSGPYVPTVKDNVSGLVWQQYYTTFPNQGAQFTQSVAKQYC
AAIGMRLPTQNEALTVARANFASCAFPGSWGTWTTTGVPGVPTQAYLVFSSGESAGGIID
NTPGWSLCVSGNAADVPVISAHPASVTVSEGQVAQFSVGVTGTGPFSFQWLRNNAVVAIT
TNPTYTTPPTTIAADNGATYSVIVTNGGGSVTSGKATLTVTAATGGNGGDGGDGNNGNNG
GNGGDGGDGGNGGLPSANLARGKVATSSGVQDEGYAPANAVDGNTGSRWSSDFNDDAWIT
IDLGTPTQFDRIVLNWENAYGKAYLLQSSSNGQDWNNIVPQRAGAGGVEDISLPVTTARY
VRMQGVKRASQYGYSLFEFEIYNSAATPKLTVTATAGANGAISPSGEVGVIQGGSQTFTA
QPAAGYGVGSMTVDGQNLGVQSTYTFTNVTAKHSISVTFVPLSASVNLALNRPATSSGDE
NGNTPPAAAVDGNTGTRWSSKFIDPSWITIDLGSEQTFNRVVLNWENAHGIAYQIQTSHD
NVDWSNTVYNQTDGKGGVEDLSFASTTARYVRLYGTKRSTDYGYSLFEFGVYNNVTSTQQ
ALK
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctttgctctgcgacacacgccgtcgcgagcgaagcgcttccgccatccaat
cacatcaggatcaatctcggcgcgacgccctggaagtacatcaaggacgccgacgacgcc
aattcgatgcagccgggtttcaacgactcggcatggagctcggtcggcgtgccgcagaca
ccgtccgacaacgacaccttcctcaactggaagtcgggtggcgatcagggctacctgtcg
ggcaatatcaactggtatcgcaagcacttctcgctcgatccgtcctacgcgaaccgcaag
atctatatcgagttcgaaggcgcgcacacgggcgcgcaggtctatatcaacgggacgctc
cttcgcggcaatagccagatcaaccgggatgcgacgcacgtgctcggcttcattccgttc
atcgtcgatatcacgaactacgtgaagttcgacggcacggacaacgtgctggccgtgaag
gtcgcgcgcggcgacaagttcttcgagtcgccgaacttcgcgggcgccttccgtttcggt
caggacgatacgggcctgttccgccccgtgtggatgcacatcacggaccgcgtgcatatc
cccgagaacatctacgccgtgctcaacacgtggggcacatatgtcgcgacggtggcggcg
agcacgtcgtcggcgacgatccgcgtgcagaccaacgtgctgaacgaatactcgacggat
aagaaggtcacgctgacgacccagatcgtcgacgcgggcggcaacgtcgtggcgaacgcg
caggacacgcgcaccgtcaccgcgaacctgtcgccggacctgcatccatcgctgttcgat
caggtgctgacggtcgcgaatccgaacctctggtatccgaacaacagcatctacggcaag
ccgtatctgtatcacgtgattcacacggtcagcatcgacggtgtggtcgtcgatacggcg
gaaagcccgctcggcatccgcacgatcacgtgggaccagaacttcccgatcatcaacgga
cacccgcattacctgtggggcgcatcgggccgctacgactatccggcgctcggctcggcc
gtgccggcggaactgcaatggaaggacctgagcctgctcgcgcaggcgggcggcagtctg
tatcgtcccggccactcgagccagggacgcgagttcctcgatgccgccgacgcctatggc
gtgatgatggttcagccgagcggcgagggcgaaggcggtttcggcatcatctgcaatgcg
cagactgatccgaaagtcgcgtgcatgacgcagaacaacgtcacgctgaagacggaactg
catcgcgacatgatcgtgcacgatcgcaaccatccgtccgtgctcgcatgggaagccgat
aacggcacgacggatacggcattcgcgcaatcgctgaagacggtttcgcagatgtgggac
cccatcaacacgcgcgcgcaggcggaccgcacgccgaacccgaacaacggcgacatcctc
ggctgtagcggcaacggctgcgacatcaacgtcaagaaggacttcccgaactcgcccgca
tggggctcggaatactggggcgacggcgtcggccgctggaagtacgacttcgaactcgcg
ttcgccgtgaagtatctgaaggaatgggtggcgagcgtcgccggcaagtcgttcggtatc
gcgcactggtatctcgccgatacaccgggcgaaaccaatacgcagacagacggcatcgac
ccggattccgtgcgcggcaacggcgcatcgatgatggacgcgaaccgcctgccgcgcctg
atctactacatctatcaggcggtgtggacgccgttcgagatcaagcccgtcgtcaagctc
gcgcatacgtggaaccgttccggctccgtgaccgtcaacgcgttcagcaactgcccggca
gtgcgtctgcggttgaacggcgaactggtcggcggcgatcaggcgccgaatccgacgtcg
tctgacccgagcgccgacatgacgcagaacacgacgctgctgcccggccaggtgcactgg
gacaacgtgaagtgggcgcccggcacgctgacggcagagtgtctcgacaacaaccgtcag
gtcgcggccagcgattcgctcgtcacggccggtcccgccgatcacattctgctgaccgtc
gagcccgaactcgtcaagccgaacggcgagtcgttcgcgctcaccgcaaacggcacggat
gccgccatcattacggcgaccgtcgtcgacgcgatcaacgtgcgcgtgcccgatgcatcg
cagacgctgacgttcgccgtcagcggccccggcacgtatcgcggtggctccgatcacgac
gtgacgccgaaccagccgctgtcgtatcacgcacctggcgatccgaacctgtcggtcgaa
ggcggcatgacgcgcatcgccgtcaagacgcagttcgcgcccggcacggtgacggtgacg
gcgacgtcgcccggtctaggcagcggcacgacgtcgttcaacgtcgtgccgacggccgac
cagcaggtcttcaacggcaatggactcgtggtcggtccgcaaccgccgagcgcgttgcgc
atcgtcacgcagcccgccgatcagatcgtcacgcaaggacagagcgggcagttctcggtg
ctgtcggcgggcgcggcgcccatcgcgtatcaatggatgaagaacggcgcggccattccc
ggcgcaaccggctacgcgtacatgacgcccgccgtcgcatcgggcgacaacggcgcgacg
tacagcgtcgccgtgaccaacgccaacagcagcgtcacgtcgcgtacggcgagcctgacg
gtcgtgcagcccgctgcgccgaccatcgtcacgcagccgctgtcgctcagcatcacgagc
gggcagagcgcggaattctccgtggtcgcagccggctcgcccgtgctgtcgtatcagtgg
acgaagaacggcgagtccgttccgggcgcgaaccagcccgtgtacgacacgcccgcgacg
cagacgtcggacagcggctcggtgtacagagccgtcgtgaccaacagcgcaggcacggtc
acgtcgcaggacgcgacgctgacggtgagcgtggcgacaccgcccgtcatcgtgtcgcag
ccacacagccagagcgtgccgttcggccagagcgtgacgttcaacgtgctcgcaagcggc
tcgacaccgctgaagtatcagtggacgaaggacggcaagccgtacggcacgaacgcggcg
agtatcgcgatcgtgtcggcgcagggcagcgacgccggcgactatgccgtgacgatcagc
aacagcgcaggcagcatcacgagcgatcacgtcacgctgacggtgagcggcgccgacaac
agcaacctcgcgctcggcgcgaaggccacctcgagcagcgaccagaacggcggcctgacc
gcgcagaacgcgatcgacggttcggttgcgtcgcgctggtcgtcggccccgcaaatcgat
ccgtcgtggatcacggtcgatctcggttcgatacagaccttcaacaaggtcgtgctgatg
tgggaaaacgcggcggcgtcggcgtacaagatccaggtgtcgaacgacaacggccagtgg
accaacgtgctgcccaacgatcaggtgatcgcgggtcacggcggtacggaaacgacggtg
ttcccgagcacgtcggcgcgctatgtgcgcatgctcggcctgcagcgcacgacgcagtac
ggctattcgctgttcgagttccaggtattcgacgcaccgcaatgcggcagcgaggcggag
cgcttcacgctgctgggcgcgaagcccggcacgtggaactcgaccatcgccggtctgccg
tcgggcccgtatgtgccgaccgtgaaggacaacgtgagcggtctcgtgtggcagcagtac
tacacgacgttcccgaatcagggcgcgcagttcacgcagtcggttgcgaaacagtattgc
gcggcaatcggcatgcgcctgccgacacagaacgaagcgttgacggtggcgcgcgcgaac
ttcgcgtcgtgcgcattccccggctcgtggggtacgtggacgacgacgggcgtgcccggt
gtgccgacgcaggcatatctcgtgttctcgtcgggcgagtccgcgggcggcatcatcgac
aacacgccgggctggtcgctgtgcgtatccggcaatgccgccgatgtgcccgtgatctcg
gcgcatccggcgagcgtgacggtgagcgaagggcaggtcgcgcagttctcggtcggtgtg
acgggaacgggtccgttctcgttccagtggctgcgcaacaacgcagtggtcgcgatcacg
accaacccgacgtacacgacgccgcccacgacgatcgccgccgacaacggcgcgacgtat
agcgtgatcgtcaccaacggcggcggcagcgtcaccagcgggaaggctacgctgaccgtg
acggctgctacgggtggtaacggtggcgacggcggtgacggtaacaacggcaataacggc
ggcaatggcggtgacggtggtgacggaggcaacggcggcttgccgagcgccaatctcgcg
cgcggcaaggtcgcgacgtcgagcggcgtgcaggacgaaggctatgcgcccgccaatgct
gtcgacggcaacacgggttcgcgctggtcgtcggatttcaacgacgacgcctggatcacg
atcgatctcggcacgccgacgcagttcgaccgcatcgtgctgaactgggaaaacgcttac
ggcaaggcctatctgctgcagtcgtcgagcaatggccaggactggaacaacatcgttccg
caacgcgcgggcgcaggcggcgtcgaggacatctcgctgcccgtcacgacagcgcgctat
gtccgtatgcagggcgtcaagcgggcgtcgcagtatggctattcgctgttcgagttcgag
atctacaactcggcggcgacgccgaagctgacggtcacggcgacggcgggcgcgaacggc
gcgatcagcccgtcgggtgaagtcggcgtgattcagggcggctcgcagactttcacggcg
caaccggcagccggttacggcgtgggctcgatgacggtggacggccagaacctaggcgtg
caatcgacgtacacgttcaccaacgtcaccgcgaagcacagcatcagcgtgaccttcgtg
ccgctgtcggcgagcgtgaatctggcgctcaaccggccggcgacgtcgagcggcgacgag
aacggcaacacgccgcctgcggcagccgtcgacggcaacacgggcacgcgctggtcgtcg
aagttcatcgacccgtcgtggatcacgatcgatctcggttcggagcagaccttcaaccgc
gtggtgctgaactgggagaacgcgcacggtatcgcgtatcagatccagacgtcgcacgac
aacgtcgactggtcgaacaccgtctacaaccagacggacggcaagggcggcgtggaagac
ctgtcgttcgcgagcacgacggcgcgctacgtgcgcctgtacggcacgaagcgttcgacg
gactacggctactcgctgttcgagttcggcgtgtacaacaacgtaacgtcgacgcagcag
gcactcaagtag
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