Proteiniphilum saccharofermentans: PSM36_0223
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Entry
PSM36_0223 CDS
T04672
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psac
Proteiniphilum saccharofermentans
Pathway
psac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSM36_0223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psac03021
]
PSM36_0223
Transcription machinery [BR:
psac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSM36_0223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_40
GerE
HTH_23
HTH_24
HTH_28
Sigma70_ECF
PCI
HTH_11
HTH_Tnp_ISL3
HTH_10
HTH_38
HTH_36
HTH_Mga
M3K_C
HTH_20
HTH_AsnC-type
DUF6362
HTH_7
HIGH_NTase1_ass
HTH_26
KORA
Motif
Other DBs
NCBI-ProteinID:
SCD19059
UniProt:
A0A1R3SYV5
LinkDB
All DBs
Position
I:complement(318431..318937)
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AA seq
168 aa
AA seq
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MRVLEKRFSGYFCTYYRQLCLYALHFMGNAEEAEDVVQETFVSLWNKREQIESIRSVKSY
LYTAVRNNCLTRIRDAKPTTSLDILPDEQFAEEDQMKRAEMEARIWKMIDELPERRREIF
LMAKRDGISYKEIAEQTGLSVKTVENHVFRAMQSLRNKDFNAYLFFFA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgagagttttagaaaaaaggttttccggatatttctgcacttattaccgtcagctttgt
ctgtacgccttgcattttatgggtaacgccgaggaagccgaggatgtggttcaggaaaca
ttcgtgagtctctggaataaaagggaacagatagaatcgatcaggtcggtgaaatcatac
ctctatacagccgtccggaataactgcctgacacgtatccgtgatgcgaagcctactact
tcactcgatatactccccgacgaacagtttgctgaagaagatcagatgaaacgtgccgaa
atggaagcccgtatctggaaaatgatagacgaactaccggagcgccgtcgcgagatcttc
ctgatggcaaaacgcgacggaataagctacaaagagattgccgaacaaaccggattatcg
gtaaaaaccgtggagaaccacgtatttcgcgccatgcaatcgctccggaacaaagacttc
aatgcgtatcttttcttttttgcgtaa
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