KEGG   Proteiniphilum saccharofermentans: PSM36_0223
Entry
PSM36_0223        CDS       T04672                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psac  Proteiniphilum saccharofermentans
Pathway
psac02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psac00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSM36_0223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psac03021]
    PSM36_0223
Transcription machinery [BR:psac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSM36_0223
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_40 GerE HTH_23 HTH_24 HTH_28 Sigma70_ECF PCI HTH_11 HTH_Tnp_ISL3 HTH_10 HTH_38 HTH_36 HTH_Mga M3K_C HTH_20 HTH_AsnC-type DUF6362 HTH_7 HIGH_NTase1_ass HTH_26 KORA
Other DBs
NCBI-ProteinID: SCD19059
UniProt: A0A1R3SYV5
LinkDB
Position
I:complement(318431..318937)
AA seq 168 aa
MRVLEKRFSGYFCTYYRQLCLYALHFMGNAEEAEDVVQETFVSLWNKREQIESIRSVKSY
LYTAVRNNCLTRIRDAKPTTSLDILPDEQFAEEDQMKRAEMEARIWKMIDELPERRREIF
LMAKRDGISYKEIAEQTGLSVKTVENHVFRAMQSLRNKDFNAYLFFFA
NT seq 507 nt   +upstreamnt  +downstreamnt
atgagagttttagaaaaaaggttttccggatatttctgcacttattaccgtcagctttgt
ctgtacgccttgcattttatgggtaacgccgaggaagccgaggatgtggttcaggaaaca
ttcgtgagtctctggaataaaagggaacagatagaatcgatcaggtcggtgaaatcatac
ctctatacagccgtccggaataactgcctgacacgtatccgtgatgcgaagcctactact
tcactcgatatactccccgacgaacagtttgctgaagaagatcagatgaaacgtgccgaa
atggaagcccgtatctggaaaatgatagacgaactaccggagcgccgtcgcgagatcttc
ctgatggcaaaacgcgacggaataagctacaaagagattgccgaacaaaccggattatcg
gtaaaaaccgtggagaaccacgtatttcgcgccatgcaatcgctccggaacaaagacttc
aatgcgtatcttttcttttttgcgtaa

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