Pseudomonas salmasensis: HU731_024230
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Entry
HU731_024230 CDS
T07619
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
psam
Pseudomonas salmasensis
Pathway
psam00521
Streptomycin biosynthesis
psam00523
Polyketide sugar unit biosynthesis
psam00541
O-Antigen nucleotide sugar biosynthesis
psam01100
Metabolic pathways
psam01110
Biosynthesis of secondary metabolites
psam01250
Biosynthesis of nucleotide sugars
Module
psam_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
psam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HU731_024230 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HU731_024230 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HU731_024230 (rfbC)
Enzymes [BR:
psam01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HU731_024230 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
FdtA
Cupin_1
Motif
Other DBs
NCBI-ProteinID:
QXH77507
UniProt:
A0AA92MTT4
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All DBs
Position
5377198..5378175
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AA seq
325 aa
AA seq
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MKFIETKLAGVVIIEPKVFADDRGWFMESFNEPLFHEQLAEFGHPIPRPFVQDNHSCSKK
HVLRGLHFQRDPHAQGKLVRVTAGSAYDVAVDIRKGSETFGQWLGVELSAKNGRMLWIPE
GFAHGFLALEDNTEFLYKTTDTYSKACEQSINWNDPAIGIQWPVTEGLIISQKDEEAPLL
SEVVASVSALTGNVTSSELQVIGDDRGSLIALEQGRDIPFDVRRAYYIFNTKAGISRGSH
AHFRLEQYIICLSGKCRILIDDGVTQESIWLDAPNKAIHIKKLIWREMHDFSEDCVLLVF
ASNHYDEGDYLRNYDDFMRAVKRYA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatagaaaccaagctggccggtgtggtcatcattgagccaaaagtattcgcg
gatgaccgtggatggtttatggaaagtttcaatgagccgttgtttcatgaacaactcgcc
gagtttggtcaccccattccgcgcccattcgtgcaagacaatcactcctgctcaaaaaag
cacgtcttaagagggcttcattttcagcgtgatcctcatgcccagggcaagttggtacga
gttaccgcaggtagcgcctatgacgtggcggtggatatcagaaagggctcggaaacattt
ggtcagtggctaggggttgaactctccgcaaaaaatggccggatgctttggattccagaa
gggtttgcacacggctttttggcgttggaggacaatactgagtttctctacaagaccaca
gatacctattccaaggcttgtgagcaatcgatcaactggaatgaccccgccattggcatc
caatggccagtgactgaagggttgatcatcagtcagaaggatgaagaggcaccgttgctc
tcggaagtagtggcctctgtttcggcactgacgggcaatgtgacgtcgagtgagttgcaa
gtaattggagatgatcgtggcagcctgattgccctggagcaagggcgcgatattccgttc
gacgtcaggcgagcctattatattttcaataccaaggcgggtatcagcagaggctcgcat
gcgcatttcaggttggagcagtacattatctgcttgtcgggcaaatgcagaattctgatc
gatgacggcgtgacgcaggaatcgatatggctggatgccccgaataaggccattcacatc
aagaaactgatttggcgcgagatgcacgacttcagtgaagattgcgttttgctggtattc
gcaagcaatcattacgatgaaggcgactatttgcgaaattacgatgatttcatgcgtgcg
gtgaaacgatacgcttga
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