Pisum sativum (pea): 127075626
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Entry
127075626 CDS
T08598
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
psat
Pisum sativum (pea)
Pathway
psat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127075626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psat03021
]
127075626
03019 Messenger RNA biogenesis [BR:
psat03019
]
127075626
Transcription machinery [BR:
psat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127075626
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127075626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH_2
zf-CCCH
Torus
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
127075626
NCBI-ProteinID:
XP_050873037
LinkDB
All DBs
Position
1:complement(404471278..404485482)
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AA seq
684 aa
AA seq
DB search
MEDSEGVLSFDFEGGLDAPPSAATASATVSAAPSGPIVQSDSYLPPSAASNGAPAPSIAE
PVPGNNPGRRSFRQTVCRHWLRSLCMKGEACGFLHQYDKARMPVCRFFRLYGECREQDCV
YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSTGPPPPIEEVLQKIQHLYSYNYNNSHKF
VQQRGSSYTQQVEKSQFPQAINSANQGVAGKPLAAESGNVQQQQQVQQPQQQVSQNQVQN
LANGQTNQANRTSTPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSV
ENVILVFSVNRTRHFQGCAKMTSRIGGSVPGGNWKYAHGTAHYGRNFSVKWLKLCELSFH
KTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYVEPDSELMAISIAAESKREEEKA
KGVNPDNEGENPDIVPFEDNEEEEEEESDEEEESFGNGVGPVVQGRGRGRGMMWPPHMHL
GRGARPMPGMQGFNPVMMGDGLPYGPPGPDGFGMPDLFGMGPRGFGPYGPRFSGDFGGPP
AAMMFRGRPSQPGMFPGGGFGMMMNHGRGPFMGGMGVPGPNPARGGRPVNMPPMFPPPPP
PPQNMNRIAKRDQRTSDRNDRYSSGPEQGKSQDMLSQSGGPDDDMQYQQGYKSQQDDKND
DSESEDEAPRRSRHGEGKKRKGEA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccgagggagtcctcagcttcgatttcgagggcggtctcgacgctcctccc
tccgccgccaccgcatctgccaccgtttccgctgcaccttccggtcctattgtccagtcc
gattcctacttgccaccttccgcggcttccaatggtgcccccgctccttcgattgctgag
cccgttcccggtaacaatcctggacgaaggagcttccggcaaacggtttgccggcactgg
ctacgtagtctgtgtatgaaaggcgaagcctgcgggtttttgcaccagtatgataaggct
cggatgccggtgtgccggttttttagattgtatggagagtgtcgtgagcaggattgtgtt
tacaagcacactaatgaagatatcaaggagtgtaacatgtacaagctaggattttgtcct
aacggacctgattgtcgttacaggcatgcgaaatctactggacctccacctccaattgaa
gaggtccttcagaagatccaacatttgtattcttacaattataacaattctcataaattt
gtccaacaaaggggttctagctatactcaacaagttgaaaagtctcagtttcctcaagca
atcaattctgcaaaccaaggtgtggctggaaaaccattagctgcagagtcaggaaatgtc
cagcagcagcaacaagttcaacagcctcagcagcaagtcagccagaaccaagtgcaaaat
cttgctaatggccagaccaatcaagccaatcgaacatcaactcctttacctcagggaata
tctaggtattttattgttaagagttgcaatcgtgaaaatttggagttatctgtacaacaa
ggagtatgggcaactcaaaggagcaatgaatcaaaactaaatgaagcatttgactctgta
gaaaatgtgattttggttttctcagtcaaccgtactcgacatttccagggttgtgcaaag
atgacttccagaattggtggttctgttcctggggggaactggaaatatgctcatggaacg
gcacattatggccggaatttctctgttaaatggttgaagttatgtgaactgtcattccac
aaaactcgccatttgagaaatccatacaatgaaaacttaccagtgaagataagtagagat
tgtcaggagctggaaccctctattggtgagcagttggcatccttgctttatgttgaacca
gatagcgaacttatggctatctcgattgcagctgagtctaaacgagaagaggagaaggca
aagggggtgaatccagataatgaaggagaaaatccagatattgtcccattcgaagacaat
gaagaagaggaagaggaagaaagtgatgaagaggaggagagctttggtaatggtgtaggg
ccagttgttcaaggcagaggtaggggcagaggtatgatgtggccccctcacatgcatctc
ggacgcggagccagacccatgcctggaatgcaaggttttaatccggtaatgatgggtgat
ggattaccctacgggcctcctggacctgatggttttggtatgccggatctctttggcatg
ggtccccggggttttggtccatacggtcctagattctccggtgattttggaggcccccca
gctgccatgatgttccgagggcgaccctcacaacctggaatgtttcctggtggtgggttt
gggatgatgatgaatcatggacgcggtccctttatggggggaatgggggttccaggtccc
aacccagcaagaggtggtaggccagtgaatatgcctccgatgtttccaccacctccgcct
ccaccacaaaatatgaaccgcattgccaagagagatcaaagaacaagtgatcgaaatgat
aggtacagttcaggaccagagcaaggtaagagtcaagacatgctcagtcaaagtgggggt
cctgatgatgacatgcagtatcaacaaggatacaagtcacaacaggatgacaagaatgac
gatagtgaaagcgaagacgaggcacctaggcggtcaagacatggagagggtaaaaaaaga
aaaggcgaagcttag
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integrated database retrieval system
