Pisum sativum (pea): 127085567
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Entry
127085567 CDS
T08598
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
psat
Pisum sativum (pea)
Pathway
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127085567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psat03041
]
127085567
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127085567
Spliceosome [BR:
psat03041
]
Complex A
U2 snRNP components
U2 related factors
127085567
Complex B
127085567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
127085567
NCBI-ProteinID:
XP_050882047
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All DBs
Position
1:complement(460536913..460542123)
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AA seq
1183 aa
AA seq
DB search
MDEGKHKLRKEEGDSKRSHRDRDRDRTGERGKEKDRSDGRHKDNREKRDRESRRHDREKS
TDSDDKHDREREKRRDVKEKDRARVHDVDREKVRDRKRERDREEKEKERVKEKERDREEK
EKERVRDREEKEKERVREREEKEKERGREREEKEKERGREKERERERKEDKERIREKERV
RERRDHEREKEKEKERDKGRRGREREKHRDVDSENSDGELRERNRKRHKKEDEDYKGREK
EKSSSKSNRKIEGLDASPRRKSDGDDSDSKDREKKPTREEEMEDEQRRLDDEMEKRRRRV
QEWQELRRKKEEAEREKQGEASAAELESGKAWTLEGEESDDEDGTGKHTAMDVDDDDKLA
DKEPMESMVVDVDNVTVAPDLQNGDTGAPSDEEIDPLDAFMNSMVLPEVEKLNNAVNSTP
SDKTSDLKPKDKGDGRSNGGQSRKGSSKSIGRIIPGEESDSDYADPETDGDPVEEDDDEF
MKRVKKTKVEKLSIVDHSKIDYIPFKKNFYIEVKEVSKMTLEEVALYRKQLELKIHGKDV
PKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGIAKTGSGKTLAFV
LPMLRHIKDQPPVLAGDGPIGLIMAPTRELVQQIHSDIKKFTKVMGIRCVPVYGGSGVAQ
QISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIV
QNIRPDRQTVLFSATFPRQVEILARKVLNKPVEMQVGGRSVVNKDIAQLVEVRPENERFL
RLLELLGEWYEKGKILIFVHSQEKCDALFKDLLRHGYPCLSLHGAKDQTDRESTISDFKS
NVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEED
ARYAPDLVKALELSEQIVPDDLKSLADGFMAKVTQGLEQAHGTGYGGSGFKFNEEEDEVR
KAAKKAQAKEYGFEEDKSDSEDEDDGIRKAGGDISQHPALAQIIAATKANAPSMPTPISA
TQLISNGGLPVSLPSVLGLQTATVLPGTGLPLATNDGAARAALAAINLQHNLAKIQSEAL
PEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQYFPPGKVAGPGDRKLYL
FIEGPSEQSVKRAKVELKRVLEDITNQALQLPGGTQPGKYSVV
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggatgagggaaaacataaattgagaaaagaagaaggtgattctaagaggagtcatcgt
gatcgagatcgcgatagaactggtgaaagaggtaaggaaaaggatagaagtgatggtaga
cataaggataatagggagaagagggatcgtgaatctcgtagacatgatagagagaaaagt
actgattctgatgataagcatgatagagagagggagaagcggagagatgttaaagagaag
gatagggcacgggttcatgatgtcgatagagaaaaagtgagggatagaaagagggaaagg
gatagggaagagaaagagaaggagagagtaaaggagaaagaaagagatagggaagagaaa
gaaaaggagagagtgagggatagggaagagaaggaaaaggagagagtgagggagagggaa
gagaaggaaaaggagagagggagggagagggaagagaaggaaaaggagagagggagggag
aaagaaagagagagggagagaaaggaggataaggagaggattagagagaaagaaagggta
agggaaaggcgggatcatgagagagagaaggaaaaggaaaaggaaagagataaagggagg
agaggacgagagagggagaagcatagagatgttgatagtgaaaacagtgatggtgagttg
agggagagaaatcggaagcggcataagaaagaggacgaggattataaggggagagagaag
gaaaagagttctagcaaatcaaacaggaaaattgagggacttgatgcaagccctagaaga
aagagtgacggtgatgactcggattctaaagacagagagaaaaaacctacccgtgaggag
gagatggaagatgagcaaaggaggttggacgatgaaatggaaaagcggaggagaagagtt
caagagtggcaagagttaaggaggaagaaggaagaagcggaaagagaaaagcaaggtgaa
gcaagtgctgctgaacttgagtctggaaaagcatggacacttgaaggggaggaatctgat
gatgaagatggaacaggtaaacatactgctatggatgtagacgatgacgacaaacttgct
gataaggaacctatggagtcgatggtggtagatgttgacaatgtaacagttgcgcctgat
ttacaaaatggagatactggtgctccttcagacgaggaaatagacccattggatgctttt
atgaattctatggttcttcctgaggttgagaagctgaacaatgctgttaactcaacacct
tctgataaaacttctgacttgaaacccaaagataaaggggacggacgtagtaatggcggg
cagtcaaggaaaggttcaagtaaatctattggcaggataattcctggcgaagagtccgac
tcagattatgctgatcctgaaactgacggggatccagtagaagaagatgatgacgagttc
atgaaaagagtgaagaaaacgaaagttgaaaaactttcgatagttgaccactcaaagatt
gactatataccattcaaaaagaatttctatattgaagtgaaggaggtctcaaaaatgact
ctcgaagaagttgcattatacaggaagcagttagagttgaagatacatggaaaggatgtg
cccaagcctgtaaagtcatggaaccagactggacttacgagcaaaattttggatacaata
aagaaggcgaactttgaaaagccaatgcctattcaagctcaggcgttgcctgtaattatg
agtggccgagattgcataggcattgccaaaaccgggtcaggtaaaacacttgcttttgtt
ctgccaatgttgaggcatatcaaggatcagccaccagttcttgcaggagatggacctatt
gggcttattatggcccctacaagagaacttgttcaacagattcacagtgatataaagaag
tttacaaaggtaatgggtatcaggtgtgtcccagtctatggaggctctggtgtcgctcaa
caaatcagtgagttgaaacgtggtaccgagatagttgtttgtactccaggtaggatgatt
gacatactatgcaccagtagtgggaaaataactaacctgcgtagagtcacctatctggta
atggatgaggcagatcgaatgtttgacatgggctttgaacctcaaatcacaagaattgtt
cagaatattcggccagatcgtcaaacagttctcttctctgccacttttccccgtcaggtt
gaaattttagctcgcaaggttttgaataaacctgttgaaatgcaagttggtgggaggagt
gttgtgaacaaagatattgcacagttagttgaagtgaggccagaaaatgagaggttccta
cgactcttggaactacttggagaatggtacgagaagggaaagattttaatatttgtccac
tcacaggagaaatgtgatgcattgttcaaggatctactcaggcacggatatccttgtctt
tctcttcatggagctaaggatcaaacagaccgtgaatccacaatatctgattttaaaagc
aatgtttgcaatttgttggttgcgacaagtattgctgctaggggattagatgtcaaggag
ctagaattggtaatcaattttgatgttccaaaccactatgaagattacgtacatcgtgtt
gggcgcactggtcgtgctggccggaaaggttgtgccatcacatttatttccgaagaagat
gcgagatatgcaccagatctggtgaaagctttggagctgtctgagcagattgttcccgat
gatctgaaatcccttgctgatggctttatggcgaaagtgactcaaggactggagcaagcc
catgggactggttatggaggcagtggctttaaatttaatgaagaagaagatgaggtaagg
aaagcagcaaagaaagctcaagccaaagaatatggatttgaagaagacaagtcagattct
gaagatgaagatgacggtattaggaaggcaggaggtgatatctcacagcaccctgctctt
gctcagattattgctgcgacaaaagcaaatgctccctcaatgcctactcccatctccgca
acccaactgatttcaaatggagggctgcctgtttctttgccttctgttcttggtctccag
actgcaacagtcttgcctggaacagggctaccccttgctacaaacgacggggcagctcga
gctgcactagctgctataaacctgcagcacaacttggcaaaaatacaatctgaagcattg
ccagagcattatgaggccgaactggaaataaatgatttccctcagaatgctcgctggaaa
gtcacacacaaggaaactttaggccccatttcggagtggactggagctgccattaccact
aggggacagtatttcccacctggcaaagttgctggacctggggatcgcaaactctatttg
ttcattgagggtcctagtgagcagtcagttaagagagccaaagtagaactgaagcgtgtt
ttggaagacatcactaatcaggctttgcaactacctggtggaactcaaccaggcaaatac
tctgttgtataa
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integrated database retrieval system
