Pseudomonas savastanoi pv. savastanoi: PSA3335_19845
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Entry
PSA3335_19845 CDS
T07948
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psav
Pseudomonas savastanoi pv. savastanoi
Pathway
psav03030
DNA replication
psav03430
Mismatch repair
psav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSA3335_19845
03430 Mismatch repair
PSA3335_19845
03440 Homologous recombination
PSA3335_19845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psav03032
]
PSA3335_19845
03400 DNA repair and recombination proteins [BR:
psav03400
]
PSA3335_19845
Enzymes [BR:
psav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSA3335_19845
DNA replication proteins [BR:
psav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSA3335_19845
DNA repair and recombination proteins [BR:
psav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSA3335_19845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
AAA_30
AAA_19
TIP49
PIF1
AAA_18
AAA_2
TsaE
nSTAND3
AAA_7
DUF3646
SKI
Rad17
AAA_24
Herpes_Helicase
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ARD13110
LinkDB
All DBs
Position
complement(4330703..4332916)
Genome browser
AA seq
737 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQAHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVFDVLTALLEGDARGVLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADNDDAPRQPLKPVGISQATVDSRKAVADATPVASVAPAVSTAPVMAAPDPAFEALPPAA
APMPTAAVRAEPAAQPESQPQAQPEPVEEVDLPWNEPKAPVAEKNAESAPDTGTVAEPVA
EPVLETVSEQPDLTPMPTPAPASPVPDAPEAEPVQPVAEQQVTPAMLEAIPDSAYLSMNP
DSMSSNSGPMGRDDEPPADDDYVEPDIDIDPASYSYLDELAHESVVELEAVEPEPAPAAK
PATGLAADWLEVFPKLPISGMTGSIAANCTLMAVDGDKWLLHLDPAHSALFNSTQQRRLN
DALNQYHGRTINLSIELIKPEQETPAQAASRLRAERQRQAEASIQADPYIQQMLQQFGAV
IREDTIQPVDAPAVQPQ
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
caggctcatgtgttgaaggccctgatcaacgcgctggacagccagcgcctgcaccatgcc
tatttgttcaccggcacgcgaggcgtcggcaagaccactatcgcgcggatcatcgccaag
tgcctgaactgcgagaccggcatcacctccacgccctgtggcacttgctcggtgtgcaaa
gagatcgatgaaggtcgtttcgtcgacctgatcgagatcgacgccgccagccgcaccaag
gtcgaagacacgcgcgaactgctggataacgtgcagtacgcgccaagtcgcggtcgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagtcactcgttcaacgccttgctc
aagacgcttgaagagccgccgccctacgtcaagttcatcctcgctaccaccgatccgcag
aagctgcctgcgaccattctgtcgcgctgcctgcagttctcgctgaaaaacatgacgcca
gaacgtgtggtcgagcacctgacccacgtgctgggcgtcgagaatgtgccgttcgaagac
gacgcgctgtggctgctcgggcgcgctgccgacggttcgatgcgtgacgcgatgagcctg
accgatcaggccattgcctttggtgaaggcaaggtcatggctgccgatgtgcgcgccatg
ctcggcacactggatcatggtcaggtgttcgatgtgctgactgcgttgctggaaggcgac
gctcgcggtgtgctggaggcggtacgccacctggccgagcaggggcctgactggaatggt
gtgctctcggaaattctcaatgttctgcaccgcgtggcgattgcccaagcgttgcccgaa
ggcgtcgacaacgggcacggcgaccgcgaccgggtgttggcgctggcccaggcattgcct
gccgaagacgtgcagttttattaccagatgggtctgattggtcgtcgtgacttgccgctg
gccccggatccgcgtggcggtttcgagatggtcctgctgcgcatgctggcgttccgcccg
gccgataacgacgatgcgccgaggcaaccgctaaagccggtggggatcagccaggccacg
gttgattcccgaaaagcagtggctgatgcgacacctgttgcatcggtagctcccgcagtt
tcaacagcaccggtgatggctgcgcccgatccggccttcgaagcgctgccgccagccgcc
gccccgatgccgaccgctgctgtacgagctgagcccgcagcacagccagaatcacagccg
caagcacagcccgagccggtcgaagaagtcgatctgccgtggaatgagccaaaggcaccg
gttgccgaaaaaaacgctgaatccgcacctgacactggcactgttgcagaaccggtagcc
gagccggttctggagactgtctccgaacagccagacctcacgccaatgccgacgcctgcg
cccgccagcccagtgccagatgcgccggaggcggaacctgtgcagccggttgccgagcag
caggttacaccggcgatgcttgaagccatccctgattccgcctatctgtccatgaatccg
gattcgatgtcttcgaattccggcccaatggggcgcgatgacgagccgccagcggatgac
gattacgtcgagccggatatcgacatcgacccggcgtcctatagctatctggatgaactg
gcccacgagagcgtcgtcgagcttgaagcggtcgagcccgagcccgctccggccgccaaa
ccagccaccggccttgctgccgactggctggaggtattccccaaactgccgatctccggc
atgaccggcagcattgccgccaactgcaccttgatggcggtcgatggcgataagtggctg
ctgcacctggacccggcgcacagcgccctgttcaactcaacccagcagcgccgcctgaac
gatgcgttgaaccagtatcatggtcgcacgatcaatctgagtatcgagctgatcaagccc
gagcaggaaactcctgcccaggctgcttcgcgactgcgtgccgagcgtcagcgtcaggcc
gaagcctcgatccaggccgacccgtatatccagcagatgttgcagcagtttggcgctgtt
atccgggaagatactatccagcccgtagacgcgcctgcggtgcagcctcaataa
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