Pseudoalteromonas sp. A25: PA25_02630
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Entry
PA25_02630 CDS
T07990
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz03030
DNA replication
psaz03430
Mismatch repair
psaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PA25_02630 (ssb)
03430 Mismatch repair
PA25_02630 (ssb)
03440 Homologous recombination
PA25_02630 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psaz03032
]
PA25_02630 (ssb)
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_02630 (ssb)
03029 Mitochondrial biogenesis [BR:
psaz03029
]
PA25_02630 (ssb)
DNA replication proteins [BR:
psaz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PA25_02630 (ssb)
DNA repair and recombination proteins [BR:
psaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
PA25_02630 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
PA25_02630 (ssb)
Mitochondrial biogenesis [BR:
psaz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
PA25_02630 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
Lin-8
TFIIA
Motif
Other DBs
NCBI-ProteinID:
BBN80278
UniProt:
A0A5H2XT46
LinkDB
All DBs
Position
1:301436..302107
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AA seq
223 aa
AA seq
DB search
MARGVNKVILVGNLGQDPEVRYMPNGNGVANISIATTDSWKDKNTGQLQERTEWHRVVLF
GKLAEVAGEYLRKGSQVYIEGRLQTRKWTDQSGQEKYTTEIVVDMGGQMQMLGGRNEQQG
SAPYQGGQQQSNYTQQQYNQAPQQQQQQYAPQAQSNQSHSQQQSSGYAPAQQSNQGQSGG
FAPQQPQQSAPQQQGGFAPKPAQSGGASNPMEPPIDFDDDIPF
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcggtgtaaacaaagttattttggttggtaatctaggacaagatccagaagta
cgctatatgccaaatggcaatggtgttgcaaatattagtattgccactactgacagctgg
aaagacaaaaatacaggccagttgcaagaacgcaccgagtggcaccgagtggtgctgttt
ggcaagctagcagaagtagcaggggaatacttacgaaaaggttcacaagtttatattgaa
ggccgtttacaaactcgtaagtggacagatcaaagtggtcaagaaaaatatacgactgag
atagttgttgatatgggtggccaaatgcaaatgttgggcggccgtaatgagcagcaaggc
agtgcaccatatcaaggtggtcaacagcaaagtaactatactcagcaacagtataaccaa
gcaccacaacagcagcagcaacagtatgcacctcaggctcaaagtaaccagagccactcg
cagcaacaaagcagcggatatgcgcctgcacaacaaagcaatcaaggccaaagtggtggt
tttgcgcctcagcaaccacaacaaagtgcgccacagcagcaaggcggctttgcaccaaaa
ccggcgcaatcaggcggcgcatctaacccgatggaaccacctattgattttgatgatgat
attccgttctaa
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