Pseudoalteromonas sp. A25: PA25_09540
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Entry
PA25_09540 CDS
T07990
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
psaz
Pseudoalteromonas sp. A25
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psaz03400
]
PA25_09540
DNA repair and recombination proteins [BR:
psaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PA25_09540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
ERCC3_RAD25_C
AAA
AAA_30
AAA_16
SLFN-g3_helicase
QRPTase_N
DZR
Motif
Other DBs
NCBI-ProteinID:
BBN80969
UniProt:
A0A5H2XUR5
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All DBs
Position
1:1115480..1117225
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AA seq
581 aa
AA seq
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MHIYTLRPYQQEAVYNTIAHFKRSNEPAVIVLPTGAGKSLVIAELARLARHKILVLAHVK
ELVEQNAQKYASFGLTASIFSAGLKQKSLAEQVTFASVQSVARNLDELNEFYSLIIIDEC
HRVSGEPQSQYEKVISKLKTYNTNLKVLGLTATPYRLGMGWIYHRHYHGFVRGTHSSPFK
SCIYELPLRYMIKNKYLTPPKEIDPAVSHYDFSQLETDQFGAYSQKDMNTLLASQTRATF
SIVSHIIELSEKRQGVMIFASTVEHAKEILDYLPSGNAQLIIGDTENILRDNIINDFKNK
KLKYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSKHKTDCLIIDYAGN
NFNLFNPEVGSKKPTSDSEPVQVLCPGCGFANIFWGKINDQGQVIEHYGRRCKGLLGEGA
EQQQCDYRFRFKECEACGSENDIAARQCWQCHVTLVDPDDKLRAALNLKNAMVLRCSGLS
VTLLNEQKIKVTYFDEDGASCDEIYDFSNPKSQYVFNADFGKRTRQKTSQIRWQSAQQVV
QMQGVLCAPDFVIAKQHKKYGWQVSDKIFDYEGHYRVADKS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgcatatttatacactcagaccataccaacaagaagctgtttataatacgatagctcac
tttaagcgcagtaatgaaccggctgtaatcgtattaccaacaggagctggtaaaagtttg
gttattgctgaactagctcgtttagctcgacacaagatccttgttttggcacatgttaaa
gagttggtagagcaaaatgctcaaaaatacgctagctttggcctcacagcgagtatattt
tcagcaggtttgaaacaaaagtcgcttgctgagcaggtcacgtttgcgagtgttcaatct
gttgcgcgcaatttagatgagttaaatgagttttactccttaataatcatcgatgagtgc
catcgggtgagtggtgagccgcaaagccaatatgaaaaagtgatcagtaaattaaagacc
tataatacaaacttaaaggtattaggtttaacggcaacgccctatcgattgggtatgggc
tggatatatcaccgtcactaccatggatttgtaagaggaacgcactccagcccatttaaa
tcatgtatttatgagttgccgctgcgttatatgatcaaaaataagtatttaacgccaccc
aaagaaattgaccctgcagtttctcactatgacttttctcaattagaaacagatcaattc
ggcgcttattctcaaaaagatatgaataccttgttagcatctcaaaccagagcgactttt
agtattgtttctcatattattgaactcagtgaaaagcgccaaggtgttatgatttttgcg
tctacagtggagcatgcaaaggaaatattggattatttacccagtggcaatgctcagctg
ataattggtgatacagaaaatatacttagagataatattattaatgattttaaaaataaa
aagttaaaatacttagtaaatgtttctgtattaaccactggttttgatgcacctcacgtg
gatctaatcgcaattttaagacctacagaatcagtaagcttatatcagcaaatagttgga
cgaggcttacgtttatctaaacataaaacagactgtttgataattgattatgctgggaat
aattttaacttatttaaccctgaggtgggtagcaaaaagcctacgtctgattctgagccg
gttcaagtgctatgtcccggttgcggttttgccaatattttttggggtaaaataaatgat
caaggtcaagttatcgaacattatggccgacgctgcaagggcttgctaggtgaaggtgct
gagcagcaacagtgtgactaccgttttcgttttaaagagtgtgaagcgtgtggcagtgaa
aatgatattgccgctaggcaatgttggcagtgtcatgtcactttggtcgaccctgatgat
aaactacgggcggcattaaatctcaaaaacgcaatggttttaaggtgtagtggcctgagt
gtgactttgttaaatgagcaaaaaatcaaagtaacttactttgatgaagatggcgcaagt
tgtgatgaaatatatgatttttctaaccccaagagtcaatatgtgttcaatgctgatttc
ggtaaaagaactcggcaaaaaacttcacagataaggtggcaaagtgctcagcaggttgtg
caaatgcaaggcgtgctatgtgctcctgattttgtcatcgccaaacagcacaaaaagtat
ggttggcaggttagcgacaagatatttgactatgaaggacattatcgcgttgcagataaa
tcttag
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