Pseudoalteromonas sp. A25: PA25_27180
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Entry
PA25_27180 CDS
T07990
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
psaz
Pseudoalteromonas sp. A25
Pathway
psaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PA25_27180 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psaz03019
]
PA25_27180 (pcnB)
Enzymes [BR:
psaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PA25_27180 (pcnB)
Messenger RNA biogenesis [BR:
psaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PA25_27180 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BBN82733
UniProt:
A0A5H2Y2J4
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All DBs
Position
1:3235059..3236363
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AA seq
434 aa
AA seq
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MIPRSEHNISRKQLSPNAIKVLYRLKDGGYDAYLVGGCIRDILLGIEPKDFDVVTNATPE
QVKKLFRNCRLIGRRFRLAHIVFGREIIEVATMRGHHQGQDSKNPISQSSEHGQLLRDNV
YGTIEEDAERRDFSINALYYSVKDFSIHDFANGIAAIKERKIELIGDPETRYREDPVRML
RAVRFATKLDMQIAPATEAPIKDLADLLSNIPPARLFEETLKLFLNGKAEQNYHMLREMG
LFKQLFPALDAIIEQSDSGFEPRFIAQMFANTDQRINADKKVTPAFVYAALLWFPLLKRS
EQLQQQEQMPMFDAYAQAMNQVLAENAKQIAVPKRFTLGARDIWHIQMRLDKRGGQRAYR
LSQQPRFKAAYDFLLLRVESGEHQQQALADWWTDYLKQDINGQKDMVKSLPTQETGKPRR
RYRRKPKKKPQSND
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ttgatcccgcgtagcgagcacaatatttctcgcaagcaactaagtccaaatgcaattaaa
gtattgtaccgcttaaaggatggtggctatgacgcctatcttgtcggtggctgtattcga
gatattttactcggcatagagccaaaagactttgatgttgtgactaacgctactccagag
caagtaaaaaagctgtttcgtaattgtcggttaattggccgacgttttcgcttggcacat
atcgtatttggtcgtgaaattattgaagtagcaacaatgcgcggccaccatcagggccaa
gatagtaaaaacccgataagccaatcgagtgagcatggacaactactcagagacaacgtc
tatggcaccattgaagaagatgcagaacgtcgcgacttctctattaacgcgctttattac
tccgttaaagactttagcattcatgacttcgccaatggtattgccgcaataaaagagcgc
aaaattgaactgatcggcgatcccgaaactcgatatcgagaggacccagtacgaatgcta
cgtgctgtgcgttttgcaacaaaactcgatatgcagatcgcgccagcaaccgaggcgcca
attaaagacttagccgacttgttgagtaatattccaccggctagattatttgaagaaaca
ttaaaattatttcttaatggtaaagctgagcaaaactaccacatgctaagagagatgggc
ttatttaagcaactatttccagctcttgatgccattattgagcaaagcgacagtggtttc
gagccgcgctttatcgcacaaatgtttgcaaataccgatcagcgtatcaatgcagacaaa
aaagtaactcctgcatttgtctatgctgcactactttggttccctctgctaaaacgcagt
gagcaacttcaacaacaagaacaaatgcccatgtttgatgcgtatgcacaagcgatgaac
caagtactcgcagaaaatgccaaacaaatcgcagtaccaaagcgttttacgctgggagcg
cgtgatatttggcatattcaaatgcgtttagacaagcgcggtggtcaaagagcgtatcga
ctgtctcaacaacctcgctttaaggctgcttatgactttttactacttcgtgtagaaagc
ggagagcatcaacagcaagcattggctgattggtggacagattatttaaagcaagatatc
aatggccaaaaagatatggtgaagtcgctaccgacccaagaaacaggcaagcctcgtcgc
cgttatcgccgcaaacccaaaaagaaaccacaaagcaatgactaa
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