Pseudomonas syringae pv. syringae B728a: Psyr_1825
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Entry
Psyr_1825 CDS
T00246
Name
(GenBank) DNA polymerase III, tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb03030
DNA replication
psb03430
Mismatch repair
psb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psyr_1825
03430 Mismatch repair
Psyr_1825
03440 Homologous recombination
Psyr_1825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psb03032
]
Psyr_1825
03400 DNA repair and recombination proteins [BR:
psb03400
]
Psyr_1825
Enzymes [BR:
psb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psyr_1825
DNA replication proteins [BR:
psb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Psyr_1825
DNA repair and recombination proteins [BR:
psb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Psyr_1825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
AAA_30
AAA_19
TIP49
PIF1
AAA_18
AAA_2
TsaE
nSTAND3
DUF3646
AAA_7
Band_7
SKI
Rad17
AAA_24
Herpes_Helicase
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AAY36872
UniProt:
Q4ZVF0
LinkDB
All DBs
Position
2105845..2108055
Genome browser
AA seq
736 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQAHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVFDVLTALLEGDARGVLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADSEDAPRQPLKPVGISQATVDSRKAVADATPVASAAPAVSSAPVMAAPDPSFEALPPAA
APKPPAARPEPAVQPESKPEPQAAPVEDLDLPWNEPKSPAAEPAAETAPDTDTAAEPVAE
PVLETVSEQPDLTPMPTPAPASPVPAAPEAEPEQPVAEQQDAPAMLEAIPDSAYLSTHTD
SMSSDSGPMGRDDEPPADDDYVEPDIDIDPASYSYLDELAHESVVELEAVEPEPAPAAKP
ATGLAAEWLDVFPKLPISGMTGSIAANCTLISVDGDNWLLHLDPAHSALFNSTQQRRLND
ALNQYHGRTINLSIELIKPEQETPAQAASRLRAERQRQAEASIQADPYIQQMLQQFGAVI
REDTIKPVDAPAVQAQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
caggctcatgtgttgaaggccctgatcaacgcgctggacagccagcgcctgcaccatgcc
tatctgttcaccggcacacggggcgtcggcaagacgactatcgcgcggatcatcgccaag
tgcctgaactgtgaaaccggcattacttcgacgccctgcggcacctgctcggtgtgcaag
gagatcgacgagggccggttcgtcgacctgatcgaaatcgacgccgccagccgcaccaag
gtcgaagacacgcgcgagctgctggataacgtgcagtacgcgcccagtcgcggtcgcttc
aaggtctacctgatcgacgaagtgcacatgctttccagccactcgttcaacgccttgctc
aagacgcttgaagagccgccgccctacgtcaagttcatcctggccaccaccgatccgcaa
aaactgccggcgaccattctgtcgcgctgcctgcagttctcgttgaaaaacatgacgcct
gagcgcgttgtcgagcacctcacccacgtgctgggcgtcgagaacgtgccgttcgaagac
gacgcgctgtggctgctcgggcgcgccgccgacggttcgatgcgtgatgcgatgagcctc
accgatcaggccattgccttcggtgaaggcaaggtcatggctgccgatgtacgtgccatg
ctcggcacgctggaccacggccaggtcttcgatgtactgaccgcgctgctggaaggcgat
gcccgcggggtgctggaggcggtacgccatctggccgagcagggccctgactggaatggc
gtgctctcggaaattctcaacgtgctgcaccgtgtggcgattgcccaggcgctgccggaa
ggcgtcgacaacggtcacggcgatcgtgaccgggtgctggccctggcgcaggccctgcct
gccgaagatgtgcagttttactaccagatgggcttgattggtcgtcgtgacttgccactg
gcccctgatccgcgtggcggcttcgagatggtcctgctgcgtatgctggcgtttcgtcct
gccgacagcgaggacgcgccgaggcagccgctaaagccagtggggatcagccaggccacg
gttgattcccgaaaagcagtggctgatgcgacacctgttgcatcggcagctcccgcagtg
tcgagcgccccggtgatggctgcgcccgacccgtccttcgaagcgctgccgcctgcagcg
gcgccgaagccgcccgccgcccggccagagcccgcggtgcagccggaatcgaagccagag
ccacaagccgcgccagtcgaagacctcgacctgccgtggaatgagccgaaatccccggct
gccgaacccgccgccgaaactgcgcctgataccgataccgctgccgagccagtcgccgag
ccggttctggagaccgtttccgagcagcctgacctgacgcccatgccgacgcctgcgccc
gccagcccggtgccggccgcacccgaggccgagcctgagcagccggttgccgagcagcag
gacgcgccggcaatgctcgaagccatcccggactctgcgtatctgtccacgcacaccgat
tcgatgtcttccgactccgggccgatggggcgtgacgacgaaccgccagcggatgatgat
tacgtcgagccggatatcgacatagacccggcgtcctacagctatctggacgagctggcc
cacgaaagtgtcgtcgagcttgaagccgtcgagccggagcctgctccggccgccaaaccg
gccaccggtcttgcggccgagtggctggacgtgttccccaagctgccgatctccggcatg
accggcagcatcgcggccaactgcacattgatctcggtcgatggcgataactggctgctg
cacctggacccggcgcacagcgcgctgttcaactcgactcagcagcggcgtctgaacgat
gcgttgaaccagtaccatgggcgcacgatcaatctgagtatcgagctgatcaagcccgag
caggaaacccctgcgcaggccgcttcacggctgcgtgccgagcgccagcgccaggccgaa
gcctcgatccaggccgacccgtacatccagcagatgctgcaacagttcggcgctgtgatc
cgggaagacacgatcaaacccgttgacgcgcctgcggtgcaggctcaataa
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