Prevotella scopos: J4856_05035
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Entry
J4856_05035 CDS
T08373
Name
(GenBank) discoidin domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
pscj
Prevotella scopos
Pathway
pscj00052
Galactose metabolism
pscj00511
Other glycan degradation
pscj00600
Sphingolipid metabolism
pscj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pscj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
J4856_05035
09103 Lipid metabolism
00600 Sphingolipid metabolism
J4856_05035
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
J4856_05035
Enzymes [BR:
pscj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
J4856_05035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
F5_F8_type_C
LacZ_4
Glyco_hydro_2
BetaGal_ABD2
V-set_CD47
Fn3_assoc
Motif
Other DBs
NCBI-ProteinID:
QUB44349
LinkDB
All DBs
Position
1:1303720..1307739
Genome browser
AA seq
1339 aa
AA seq
DB search
MYKQLLFGLLLSSLTATPIQADNHPTGGYLFGQATAPTGDEWQSPGALGYNKLPARALFS
SFSSVDEARKVLPEFAKDYLSLNGEWHFHFAKNPDKRPKDFFAKGYDDSKWDRLQVPVSW
NMAGIQKDGTLKYGVPIYVNQWVIFKYNIEPGDWKKGVMREPPKNYTTYEYRNEVGSFRR
SFDIPANWDGKEVYLNFDGVDSFFYLWINGHYVGFSKNSRNTAQFDITPYITKGKNEVAV
EVYRSSDGSFLEAQDMFRLPGIFRNVSVTATPKVHIADVKAIPSFEDGKGTIDLNTTLQN
LTAKNAKDLHLRWSIYKNRLFADDNELVATFEDTKTRTACGSNAQTDLRQTLTLNNVAAW
TAEAPNVYVLVGELLQGKKVVETISFQTGFRTVEIKDTPASQDEFGLAGRYYYINGKPVK
LKGVNRHDTNPLTGKVISREQMEREIMLMKRANINHIRTSHYPNDPYFYYLCNKYGIYLE
SEANIESHEYFYGKASLSHVPEFQAAHVDRVMTMTRQLVNQPSIVIWSLGNEAGPGHNFV
VAYDSLKAYDASRPVQYERNNDIVDIGSNQYPSIAWTRDAVKGKMNIKYPFHISEYAHSM
GNAVGNLVDYWNAMESTNFFMGGAIWDWIDQSMYNYTKDGKRYLGYGGDFGDTPNDGQFV
MNGIIFGDELPKPQYYEVKKVYQYIGTSWKDTKTATLDVFNKNYYTDDLSNYAMSYELTA
DGVRVKQGELELGSVPARKHKSITIAGLNEGLDPNKEYLLHVTYRLKRDMPWAKAGYIQA
EEQLPVQVAAVRPALDAKGKVMISTVKDNKLALSGKDFTTTFDLSKGTIYNLQYAGKTII
PDGCGPELNAFRAWVNNDNWAYEDWYANGLNNLQHKCTDYTTHANADGSVSVVFNVVSQA
PYGYRLEGGNANWKKLIEYKEKPFGKDDFHFNTQVVYTIFPDGSIESESAITSNKPNLTL
AKLGYTLRIPNQLGRLNYYGRGTIDNYPDRKTGQMIGIYAQPNVKDEFVAFPKPQDTGNH
QDTRWLSLTGDDGNGALFVAKDKMSFSALPWSDNTIAMANHPHELPQSDYTYLHLDMAIT
GLGGNSCGQGGPLKHDRVMATPHTFGYMIRPMSAVKTDALVRDANVSLKGATPLTIVRDA
EGNVTINANGAKGDIFYRINGSKKAMKYMGAVNLHDGGTISAWTKENDWLVASQTFSRIE
SIPLSVVFASSQESGEGDASHLTDGNPSTYWHTMYSVTVANYPHWVDFDCGGMKTIKGFT
YLPRQDSNNGNIKNYSIQVSNDGKTWSKPVAEGTFENNRKEKTILLTTPVRTRFVRLTAL
SEQNGQDFATGAEFKVLEK
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgtataagcaattactattcggtttactattatcgtcattaacagcgacaccgatacaa
gctgataaccatcctacgggaggctatctcttcggtcaggctacagcaccaacgggtgat
gagtggcagtcgccaggtgcattgggctacaataagttgcctgctcgtgccttgttttca
tccttctcatccgtcgatgaagcacggaaggtgctgccagagttcgcaaaggattacctt
tctctcaacggagaatggcatttccacttcgcaaaaaaccctgataaacgtccaaaggac
ttcttcgcaaagggttatgatgatagtaagtgggatcgtctgcaggtgcctgtaagctgg
aatatggcaggtattcagaaggatggaacgctgaaatatggtgtaccaatctatgtcaat
cagtgggttatctttaagtataacatcgaaccaggcgactggaagaagggtgttatgcgt
gaaccaccaaagaactataccacctacgaatatcgtaatgaagtgggttcattcagaaga
agttttgatatcccagccaactgggacggcaaggaggtctatctgaactttgatggtgtt
gactccttcttctatctatggattaacggccattacgtaggcttctcaaagaactctcgt
aacacggcacaattcgatatcacaccttatatcacaaagggtaagaacgaggtggctgtt
gaggtttaccgctcatcggatggtagtttccttgaggcgcaagacatgttccgcctgcct
ggtatcttccgtaacgtgagtgttacggcaacgccaaaggtgcatatcgctgacgtgaag
gcaatcccttcctttgaagatggtaagggtactatcgacctcaatacaacactgcagaac
ctcactgctaagaatgcaaaggacctccacctccgttggagcatctataagaacagactc
tttgctgacgacaacgaactcgttgcaaccttcgaggatacgaagacgaggaccgcttgt
ggcagcaatgcccagaccgacctccggcagacgctcaccctgaacaatgtggcagcgtgg
acggctgaagcgccaaatgtctatgtccttgttggcgagctgttgcaggggaagaaggtt
gttgaaaccatcagtttccaaactggtttccgtaccgttgagattaaggatacacctgcc
agtcaggacgagttcggtttggctggaagatattattatatcaatggtaaacctgtgaaa
ctcaagggtgtcaaccgccacgacacgaatccattgacgggtaaggtgatttctcgtgag
cagatggaacgtgagattatgctgatgaaacgtgcgaatatcaaccacatccgtacctca
cattatcctaacgacccttacttctattatctctgcaacaagtatggtatctacttggag
agcgaagccaacatcgagagccacgaatacttctatggcaaggcgtcactttctcacgtg
ccagagttccaagcagcccacgtcgatcgcgtcatgacaatgacacgtcagttggtcaat
cagccatccatcgtaatctggagtcttggcaacgaggcaggaccaggtcataacttcgtt
gtagcttacgactctttgaaggcttacgatgcatcccgacccgttcagtatgagcgcaat
aacgacatcgtggatataggttctaaccagtatccaagtattgcgtggactcgtgatgcc
gtgaaaggaaagatgaacatcaagtatcctttccacatctcagagtatgcccactcaatg
ggtaatgctgtcggcaacctcgttgactattggaacgcgatggagtcaaccaacttcttc
atgggtggtgccatctgggactggattgaccagagtatgtataactacacaaaggatggc
aaacgttacctaggttatggtggcgacttcggtgatacacctaatgacggccagttcgtt
atgaatggtatcatcttcggagatgagctgccaaagccacaatactatgaggtgaagaag
gtttatcagtatattggtacaagctggaaggatacgaagaccgctactctggacgtattc
aataagaactattacacggatgacctcagcaattacgctatgtcgtacgagttgacagct
gatggcgtacgcgtaaaacagggcgagctcgaacttggtagcgtacccgcacgaaagcat
aagagcatcacgatagcaggcctcaacgagggtctcgaccctaacaaggagtacctcctt
cacgttacctatcgtctcaaacgtgacatgccatgggctaaggcgggctatattcaggct
gaggagcagttgcctgtacaggtagcagcggtgcgtcctgccctcgacgcaaagggtaag
gtgatgatatctaccgtgaaggataacaagttagccctttcaggtaaggactttacgaca
acattcgacctctctaagggtactatttataaccttcaatatgctggtaagaccatcatt
cctgatggttgtggaccagaattgaacgccttccgtgcgtgggtcaacaacgacaactgg
gcttacgaggattggtatgcgaacggtttgaacaacctccaacataagtgcactgactat
accacccacgccaatgctgacggctcagtgtcagtggtcttcaacgttgtgtcacaagca
ccttatggctatcgccttgagggtggcaatgccaactggaagaagctgattgagtacaaa
gagaagcctttcggcaaggacgacttccacttcaatacgcaggtggtttacaccatcttc
cctgacggaagtatagagagtgagagtgcaatcacaagtaataaacctaacctgacactt
gcgaaattgggttatacccttcgtattcctaaccagctcggtcgtctgaactactatggt
cgtggtaccatagataactatcccgaccgcaagacgggtcagatgattggtatctatgca
cagccgaatgtgaaggatgagttcgttgccttccctaaaccacaggacactggcaaccat
caagatacacgttggctctcactgacgggtgacgatggtaacggtgcgctcttcgtggca
aaagataagatgagtttctcagcgctgccttggtcggataacaccatcgccatggctaac
cacccacacgagttgccacagagcgactacacctatctacaccttgacatggctatcacg
gggcttggtggtaacagctgtggacagggtggtccgctgaagcacgaccgtgtaatggca
acgccacataccttcggttatatgattcgtcctatgtctgcggtcaagacggacgcactc
gtgcgtgatgcgaatgtaagtctgaagggtgctaccccactgaccatcgttcgagatgcg
gaaggcaacgtgacaatcaatgcaaatggagccaaaggcgacatcttctatcgtatcaat
ggtagcaagaaggcgatgaagtacatgggagcagtgaacctacatgatggtggtaccatc
tcagcgtggacgaaggagaacgattggctcgttgcttctcaaaccttctcacgcattgag
agcatcccattgtctgttgtctttgcctcaagtcaggagagcggtgaaggtgatgcaagt
cacttaactgacggcaacccaagcacttactggcacacgatgtactcagtgacagtggca
aactaccctcactgggtcgatttcgattgtggcggtatgaagaccatcaagggcttcacc
tatcttcctcgtcaggacagcaacaatggtaacatcaagaactacagcatccaggtgagc
aacgatggtaaaacatggagcaagcctgttgctgagggtacctttgagaataaccgaaag
gagaagaccatcctcctcaccacccctgtcaggacccgcttcgtccgcctgacagccctc
agtgagcagaatggtcaggacttcgccactggggcagagtttaaggtgttggagaagtaa
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integrated database retrieval system
