KEGG   Mollisia scopiformis: LY89DRAFT_493340
Entry
LY89DRAFT_493340  CDS       T04865                                 
Name
(RefSeq) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
psco  Mollisia scopiformis
Pathway
psco03030  DNA replication
psco03410  Base excision repair
psco03420  Nucleotide excision repair
psco03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:psco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LY89DRAFT_493340
   03410 Base excision repair
    LY89DRAFT_493340
   03420 Nucleotide excision repair
    LY89DRAFT_493340
   03430 Mismatch repair
    LY89DRAFT_493340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psco03032]
    LY89DRAFT_493340
   03400 DNA repair and recombination proteins [BR:psco03400]
    LY89DRAFT_493340
Enzymes [BR:psco01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     LY89DRAFT_493340
    6.5.1.6  DNA ligase (ATP or NAD+)
     LY89DRAFT_493340
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     LY89DRAFT_493340
DNA replication proteins [BR:psco03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LY89DRAFT_493340
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     LY89DRAFT_493340
DNA repair and recombination proteins [BR:psco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LY89DRAFT_493340
   NER (nucleotide excision repair)
    Other NER factors
     LY89DRAFT_493340
   MMR (mismatch excision repair)
    Other MMR factors
     LY89DRAFT_493340
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BSP_II
Other DBs
NCBI-GeneID: 28817637
NCBI-ProteinID: XP_018073889
JGI: 493340
UniProt: A0A194XHD0
LinkDB
Position
Unknown
AA seq 899 aa
MPPKQATLGYVKDPQTSINKFFGNPNGPKAPGKQSKLAFSSKAAPPAKKEDDDASAEEPE
TKHSLKDVNGSDVEMQDSDAENKVEVKKEANTKENVKPGKDKKKRSRVEVKKEEVKKEKK
SKVKKEEVEEEDDDDEPIVKRPRRNANLVVDEDEDAPSRSADPETEAVASSSSKSALARR
GSTQSAAASEVDDALEEEEEEDDEDEKPEVAAKAREKIQTTLKSKAKDPYPDWKAGDPVP
YAALCTTFSLVEMESKRLIIQAHCSLFLRQVLRLTPNDLLPTVLLMINKLAADYAGIELG
IGESLIMKAIGESTGRSLAVIKQDQKEIGDLGLVAVKSRANQPTMFKPKPLTVRGVHKGL
MDVATTSGGGAQGRKVDLIKKLLSAADGHSSGKVDITKDKGGPSEAKFLIRFLEGKLRLG
LAERTVIVSLAHAMVCHEVDAKNSGKVPNTEQLAKGESILKDVYSELPSYETIIPIMLEH
GIFNLKDHCKLRPGVPLKPMLAKPTKAITEVLDRFENQKFTCEYKYDGERAQIHFVAHDS
AEQYAGPTSTASKTKSGGLAAIFSRNSEDLSKKYPDILAKLPTWVKSDTKSFVLDCETVG
WDMVEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLFLNGEAVVSKSLRERRALLHE
AFTPVEGEFAFATSMNGQEIDEIQQFLDESMKASCEGLMVKMLDGSESGYEPSKRSRNWL
KIKKDYLSGIGDSLDLVVLGAYFGKGKRTSVYGAFLLACYNSSSESYETVCNIGTGFSEA
VLEELHTSLSAITIDRAKPFYSHSSGNAHQPDVWFEPKYVWEVKTADLTLSPRYKAGAKE
GLEGSGEKGISLRFPRFIRVRDDKKPDMATSSRQVVEMYRKQESVTKSKGPAVDDDFEY
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgcctcccaagcaagctacgctagggtatgtcaaggatcctcagacttccataaacaag
ttctttggaaacccaaacggtccaaaggccccggggaagcaatcaaaacttgccttctca
tctaaagctgctcctccagccaagaaagaggatgatgacgcaagtgcagaagagccagag
accaaacactcattgaaggatgtaaatggaagtgatgtcgagatgcaggacagtgatgca
gaaaacaaagtggaagtgaagaaggaagccaatacgaaggagaatgttaagcctggcaag
gacaagaagaagagatcaagggtcgaggtgaagaaggaagaagtcaagaaggaaaagaaa
tccaaagtcaagaaagaggaagtcgaggaagaggatgacgatgatgagcctatcgtaaag
cgcccacgccggaacgcaaatctagtggttgatgaggacgaggatgcaccatcaagatcc
gccgatcccgaaacggaagcggtggccagttcttcctccaaatcagctcttgcacgaaga
ggatcgacacagtcagctgccgcttcagaagttgacgatgccttggaagaagaggaagag
gaagatgacgaggatgagaagcctgaagttgcggcaaaggctcgagagaagattcagacc
accctcaagtcaaaggccaaggacccataccctgattggaaggctggagacccggtccct
tacgcagctttatgcaccactttctcacttgtggagatggaatcgaagagactcatcatc
caggcacactgttctctcttcctacgacaggtcctgcgcttgacaccgaatgatctccta
cctactgtcctccttatgatcaacaaacttgctgctgattatgctggtatcgagctggga
attggcgagtcactaattatgaaagccatcggcgagtccactggtcgaagcctggctgtt
atcaagcaagatcaaaaggaaattggtgatcttggtttagtagcggtcaagtcccgcgct
aatcaacctacaatgttcaagccgaaacctttgactgttagaggtgtccataagggattg
atggatgtagcgactacttctggtggaggagctcagggtagaaaagttgatcttatcaag
aaattactttcagcagccgacggtcacagctcgggaaaggttgacatcacgaaagacaag
ggtggtccaagtgaggcgaagttcctgattcgttttcttgaaggaaagctacgacttgga
cttgccgagaggactgtcatagtctccttggcccatgcgatggtatgtcacgaggtagac
gctaagaattctggcaaggtaccgaacaccgaacagcttgcgaagggcgagtcaattctc
aaagatgtctacagcgaacttccgagctatgaaaccatcattcccattatgcttgaacat
ggtatcttcaacctcaaggaccattgcaagctacggccaggtgtccctttgaaacctatg
ttagctaagccaacaaaagctatcactgaagtgcttgatcgtttcgagaaccagaagttc
acttgtgaatacaagtatgatggagagagagcccaaatccacttcgtcgcccatgattca
gcggaacagtacgctggtccaacttctactgcctcgaagacaaagtcaggcggacttgcc
gccatcttctctcgtaattccgaggatctttccaaaaagtatcccgatatcctcgctaag
ttgccaacctgggttaagtccgataccaagagcttcgttctcgattgtgaaactgttggt
tgggacatggtcgagaagaaggttctgccatttcaacaactcatgacccgcaagaagaag
gatgtcaaggttgaagatgtcaaagtcaaggtctgcgttttcgccttcgatctacttttc
ctaaatggcgaagctgtggtctcgaagtccttgcgtgagcgccgtgctctcctccatgaa
gcgttcactccagtcgaaggagagtttgctttcgccactagcatgaacggccaagagatt
gacgagatccagcaattccttgatgaatccatgaaggcctcatgtgaaggcctcatggtg
aagatgcttgatggcagcgagtctggttacgaacccagcaagcgcagtcgcaattggttg
aagatcaagaaggattacctttccggcattggtgattctctcgatctcgttgtcttaggt
gcttactttggcaaaggcaagcgtacgtcggtctacggtgctttcctgcttgcttgctat
aacagctcttctgaatcttacgagacggtatgcaacattggcaccggcttctctgaggct
gttctcgaggaattacacacttccctgtcggcaattaccattgatcgagccaagccgttc
tactcacattcttctggcaatgcccatcaaccagatgtctggttcgagccaaagtatgtc
tgggaagtcaagactgctgatttgacgttatctcctcgatataaggccggcgcaaaggag
ggattggagggatctggagagaagggtatctcgcttcgattcccgagattcattcgagtc
agagatgacaagaagcctgatatggccactagcagcagacaggttgttgagatgtataga
aagcaggagagcgttacgaagtctaaaggtccagctgtggatgatgatttcgagtactaa

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