Mollisia scopiformis: LY89DRAFT_629844
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Entry
LY89DRAFT_629844 CDS
T04865
Name
(RefSeq) TFIIH basal transcription factor complex, subunit SSL1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
psco
Mollisia scopiformis
Pathway
psco03022
Basal transcription factors
psco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LY89DRAFT_629844
09124 Replication and repair
03420 Nucleotide excision repair
LY89DRAFT_629844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psco03021
]
LY89DRAFT_629844
03400 DNA repair and recombination proteins [BR:
psco03400
]
LY89DRAFT_629844
Transcription machinery [BR:
psco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LY89DRAFT_629844
DNA repair and recombination proteins [BR:
psco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LY89DRAFT_629844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Tfb4
DZR
Motif
Other DBs
NCBI-GeneID:
28820949
NCBI-ProteinID:
XP_018062960
JGI:
629844
UniProt:
A0A132B880
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MSDSDGEYVADDLSDDDIRAHQVSRHGTRSTGPVRGPAGSSTRGGDTNAGTSRRRAAWED
IQRSWDTVVEGADGSINSAVEGLREAGKRKRLLRDTTPLQRGIIRHLILILDLSFAMIEK
DLRPTRYLLTIRYASEFVTEYFEQNPISQLGIIGMRDGLAVRISDMSGNPTEHIEKLKKL
RDQQPQGNPSLQNALEMSRAALFHAPSHGTREILIIYGALLSSDPGDINETIAALITDRI
RVSVVGLAGEVFICSELCKRTNAGNDSSYSVALNEQHFRELVMALCTPPVTRTKKQSQSS
LLMMGFPSRTSGAGKAMSFCACHSKLTRGGYLCSRCESKVCSLPAECPACGLTLILSTHL
ARSYHHLFPLNNWVEVPWSEAKKSKACFACLTPFPEVPVKLNGSHTDVEIKGNSESGRYA
CQSCSNHFCVDCDVMAHETVHNCPGCQSDVRGSISQQDHAANSDAMVIG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcagatggagaatatgtcgcagacgacctatctgacgatgacattcgcgca
catcaggtctctcggcatggtacgcgctcgacaggacctgtgaggggacctgctggctcg
agtacgcggggcggagatacgaatgcgggaacaagcaggaggagagctgcctgggaagat
atccaaagaagttgggacacagtcgtcgaaggagcagatggcagcattaattctgcggtt
gaggggctgagagaagctgggaagaggaaacggttgttacgggatacgacaccgctgcag
agaggcattattcggcatttgatccttattcttgatttatcatttgctatgattgagaaa
gatcttcgacctacaagatacctgctcacgatccgctacgcatctgaattcgtcaccgag
tacttcgaacagaaccctatttcccagcttggcataattggtatgcgagatggacttgca
gtacggatcagtgacatgagcggaaaccctacagagcatatcgagaaactgaagaagctt
cgagatcagcagcctcaaggcaacccaagtttacagaatgcactggagatgagcagagcc
gcgctgttccacgcaccctcacatggtactcgagagatcttgatcatatatggagctttg
ttgtccagcgatcctggagacattaatgagacgattgctgccctcatcacagatcggata
cgagtatctgtcgttggtctggctggcgaagtcttcatctgctccgagctatgcaagagg
acgaatgctggtaatgatagcagttactctgttgctctcaatgaacagcatttccgggaa
ttggtaatggcactatgcacccctccagtcactcggacgaaaaagcaatcacaatccagt
ctcctgatgatgggcttcccttccagaacatctggtgctggtaaagctatgagcttttgt
gcttgtcacagcaagttaactcgaggcggttatctctgttctagatgtgaaagcaaggtt
tgcagtctgcctgctgaatgtccggcttgtggcctgacacttattctttctacgcatttg
gcgaggtcatatcaccatctctttccactcaataactgggtcgaggtaccttggtcagaa
gctaagaagtcaaaagcttgctttgcctgcctcactccgttccctgaagttcctgtgaag
ctgaatggctcgcataccgacgtggagatcaagggcaacagtgagagtggcagatatgct
tgtcaatcctgcagcaatcatttttgcgtagactgtgatgtgatggcccacgaaacggtt
cacaattgtccaggttgccaaagtgatgtccgtggttcaatatctcaacaagatcatgct
gcaaacagcgatgcaatggtcatcggttga
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