Mollisia scopiformis: LY89DRAFT_788839
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Entry
LY89DRAFT_788839 CDS
T04865
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
psco
Mollisia scopiformis
Pathway
psco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LY89DRAFT_788839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psco03021
]
LY89DRAFT_788839
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_788839
Transcription machinery [BR:
psco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
LY89DRAFT_788839
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
LY89DRAFT_788839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFIA_Pcf11
CID
VHS
zf_UBZ
UreE_C
Motif
Other DBs
NCBI-GeneID:
28832924
NCBI-ProteinID:
XP_018062814
JGI:
788839
UniProt:
A0A132B8Y7
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MSYEIPEEQIAEDFAAALADLSMNSRYEISNLTLIARENTASALVISEALKTHIKQTSPS
KKLPAFYVLDSIIKNVGTPYTLFFGRQLYSTFMESYALVDNNVRSKMVEMLKTWKEPVPG
SMDTRPVFPPEVTRPIENALIKARTSFLQAHQEQTRNQQSAMGRGRAQSTPYRETPTPPS
NYRPPTQSAQPAPGYTANYTPQQYPASMNVQQYSSQQAPAPQPPYTTQLPPNGQQYPSQQ
NGYQPHGLPPRPPNQQYPQALPNSSSWQQQRYPTPPQPSYQSQVQAVGYTAPASSLAALN
SDIENLINETKAEWSRNPHEVNFQPKIKALLDLQTVLRSQTLPPDQISLIQNQVDQLKQA
PQSAPIMQAAPAPLPPTPVVAPPPVQQPTLSSLLGPGALAALLARQSATPQPSSAVPATI
RSPPQNNSHPFQPPSSVAPATTPVPDPASLLGRLRAAGMLPGLAASTAPTPLNSSTSVAP
PPFLNTPPSAARTPLATIPNDVILKPASLKIPRPHLIASLYEQLGAPCTQCGRRFQSDQE
GKKKKAAHMDWHFHVRQRMDEAESRGQHRSWYVDELDWIRSREVEGESGTTTADSSQSSN
SAAAAKNPKLQFIPAPDDPALAAVPCPICQEKFEMKWLDEAQEFVWMDAKKVGDRIYHAS
CFAEATKDVNTKAKRGTPEPVLGKRKAEDDGFAFRAKIKSEPVA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgagattcctgaagagcaaattgcagaggactttgcagcagctcttgcagac
ctcagcatgaactcgcgttatgaaatcagtaatcttaccttgatcgctcgcgaaaatacg
gcttcagcacttgtcatctcagaggcattgaagactcatattaagcagacctctccctct
aagaagctgcctgctttctatgtcctcgattccattatcaagaacgttggtaccccgtac
accctgttctttggcagacagctctattcgactttcatggaatcatatgccctagtggat
aacaatgttcggtccaagatggttgaaatgttgaagacttggaaagaacccgttcccgga
tccatggataccagacctgtctttccacccgaggttacacggcctatcgagaatgccctc
atcaaggcccggacatcctttcttcaagctcatcaagagcagacccgaaatcagcagagt
gctatgggccgtgggcgtgcacaatccactccataccgcgagactccaacacctccaagt
aattatcggcctccaactcaatctgctcaacctgctcctggatatactgcgaactatacc
ccgcagcaatatccggcgtctatgaatgtgcagcaatactcatcacagcaagctcctgct
ccacaaccaccatacacgacccagttgccaccaaatggacaacaatacccctctcaacaa
aatggctaccagccccacggtttaccccctcgccctccaaatcaacaatatccccaagct
ttgccaaattcttcaagttggcagcaacaacgatatccaaccccgcctcaaccgtcatac
caatctcaagtgcaggctgttggctacactgctcccgcgagtagcttggctgccttaaat
tctgatattgagaacttgatcaatgaaacaaaggcggagtggtcgcggaatcctcatgag
gttaactttcaaccaaagataaaggctctgttagacctacaaaccgtcttgcgaagccaa
acgcttccgccagaccagatttctctcattcaaaatcaagtagatcaattaaagcaagcc
ccacagtctgcacctatcatgcaggctgctccggctcccctacctccaacacctgtagtg
gctcctcctcctgtacagcaacccacactgagctctcttcttggtcctggtgctcttgca
gcgctactagcgagacagtctgcaactcctcaaccaagttctgcagtgcctgctactatt
cggtcccccccccaaaataacagccacccctttcagccaccctcttctgttgctcctgct
acgacaccggttccagatccagcatctctgctagggcgcttacgggccgctggtatgctt
cctggacttgcagcaagtacagcaccaacgccactcaactcctccacttctgttgctccc
ccgccattcctaaatactcctccctcggcagcaagaacgcctctggcaacgatacccaat
gatgtcatcctgaagcctgcttcactgaagattcctcgacctcacctgatcgcaagtcta
tatgaacagctaggtgcaccatgcacgcaatgtggcagacggtttcagtcagaccaagaa
ggcaagaagaagaaagcagctcacatggattggcacttccacgtccgtcagcgtatggat
gaggctgaaagcagaggtcagcatagaagctggtatgtcgatgaattggactggatcagg
tctcgtgaggtcgaaggcgagtctgggactaccactgcagattcttcgcaaagttctaac
agtgctgcggcggccaagaatcccaagttgcagttcataccagctcctgatgatcccgcc
cttgctgctgtgccatgccccatttgccaagagaaattcgagatgaagtggcttgatgag
gcacaagagtttgtgtggatggatgccaagaaggttggtgacaggatttatcatgcaagt
tgttttgcggaggcaaccaaggacgtaaatacaaaggcaaagcgtggtactccagagcct
gttctgggcaagcgtaaggcagaggatgatggctttgcattcagagcaaagatcaagtct
gaaccagtggcttga
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