KEGG   Pseudodesulfovibrio sediminis: PSDVSF_01120
Entry
PSDVSF_01120      CDS       T08380                                 
Symbol
rfbC_1
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K01790  dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
psef  Pseudodesulfovibrio sediminis
Pathway
psef00521  Streptomycin biosynthesis
psef00523  Polyketide sugar unit biosynthesis
psef00541  O-Antigen nucleotide sugar biosynthesis
psef01100  Metabolic pathways
psef01110  Biosynthesis of secondary metabolites
psef01250  Biosynthesis of nucleotide sugars
Module
psef_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:psef00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    PSDVSF_01120 (rfbC_1)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    PSDVSF_01120 (rfbC_1)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    PSDVSF_01120 (rfbC_1)
Enzymes [BR:psef01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     PSDVSF_01120 (rfbC_1)
SSDB
Motif
Pfam: dTDP_sugar_isom MAAL_N
Other DBs
NCBI-ProteinID: BCS86870
LinkDB
Position
108602..109171
AA seq 189 aa
MQVHKTGFPGLLVLVPNVFQDERGFFLESYNRDSFLKLGIQCEFVQDNHAYSKDIGVLRG
FHFQTPPAEQAKLVWVTRGAVLDVVVDLRKGSPTYGKCHHVILSAANFKRMIVPRGFGHG
YVTIMPDTEFQYKVDGPYSPEHEGGIAWDDPDIAMDWSSALQGRSPILSEKDRRLPKLAD
FDSPFIYEV
NT seq 570 nt   +upstreamnt  +downstreamnt
atgcaggtccataagactggttttcccggccttcttgttttggtccccaacgtctttcag
gatgagcgtggtttttttctggaaagttataatcgcgattcgtttttgaagcttggcatt
caatgtgaatttgttcaggataatcatgcctattccaaggatataggcgtgctcagggga
tttcatttccaaacaccgcccgcagagcaggccaagcttgtctgggtgacgagaggagcg
gttctggatgtggtagtggatttgcggaaggggtctcctacctatgggaaatgtcatcat
gttattctgagtgcggctaacttcaaacgcatgattgtccctcgtggttttgggcatggg
tatgtcaccatcatgccggacaccgagtttcaatataaggttgatgggccatattctcct
gaacatgaaggcggtatcgcctgggatgacccggacattgccatggactggtcgtcagcc
cttcaaggtcgttcccctatattgtcagaaaaagatagacggcttcccaagctggctgat
tttgattctccttttatctacgaggtctaa

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