Pseudodesulfovibrio sediminis: PSDVSF_11940
Help
Entry
PSDVSF_11940 CDS
T08380
Name
(GenBank) hypothetical protein
Organism
psef
Pseudodesulfovibrio sediminis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
dCache_1
Cache_3-Cache_2
dCache_2
HAMP
DUF3005
DUF948
DUF4736
CHASE4
PilJ
sCache_2
Motif
Other DBs
NCBI-ProteinID:
BCS87952
LinkDB
All DBs
Position
complement(1235080..1236957)
Genome browser
AA seq
625 aa
AA seq
DB search
MFKVKLRGQLIIPLLGIVILGVAVLQVFSYLKSSEIIEDEIIHSIERDQSAAVRAVDDWV
DNMVGNLSNWSRNAQFAQAVQGDSQAVARVSVFTENALNDFPWYEALALVGQDGQVVAAS
PASYASLNVFDRGYFKTAMGGELGRSKPLISKATGSPIFVASAPIRATNGAVVGVLFAVI
RINDLYDMILSPIKIGKNGYAFAIDSTGIIVGHPNKKFVMDLNISKSGYGQAMLKQRNGI
YKYYFEEQKQWKTMVFGESEKAGWIVAVTAPLGELMSPLDSIRNSAIVGTLLMLLAVAGV
VFFIVGLIAKATQSSVDILEKVAEGDLDISIPEKSLQKVDEMGDMSRALNMMTGKLAETM
ISINQATEEVASGSNELSVTSETLAEGANTQAANIEEVSSSVEQIVSSIRRNAENATQTQ
KIALQVANDAEIGGAAVLETVKAMKDIAERISVIEDIARQTNLLALNAAIEAARAGEHGK
GFAVVAAEVRKLAEHSGNAAADISELSVSSVAIAEKAGEMLDKIIPDIKQTAELVDEIAA
ASNEQNSGASEINDSIQQLDRIIQSNASVSEEMSSTSQQLAGQSELLRSAVAFFRFNGQH
NAGAIGADTHVRVVASPPLAALRGR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaaagtaaagttgagagggcagcttattattccattactggggattgttatactt
ggagtcgctgtactacaggtgttcagctacttgaaatcttccgaaattattgaggatgaa
atcattcattcaattgaacgagaccagagcgcagcggtcagagccgttgatgattgggtc
gacaatatggtgggcaacctgtccaactggagtcgtaacgcacagtttgcccaggctgtt
caaggagattcgcaagcagtcgccagagtgtcagtcttcaccgaaaatgccttgaatgac
tttccctggtatgaagcccttgcacttgtgggacaggatgggcaagtggtggctgccagc
cctgcaagctatgccagtctcaatgtctttgatcgagggtatttcaaaaccgcgatggga
ggggagctgggccgatcaaaaccacttatcagtaaagcgacagggagcccaatctttgtc
gcttctgccccgatcagggcaacaaacggcgctgtcgtcggagtattgttcgctgttatt
cgtatcaatgatttatatgacatgatcctgtctccgatcaagatcgggaaaaatggatat
gcatttgccattgactctaccggaattattgtcggacatcccaacaagaaatttgtcatg
gatctcaatatcagcaaatccggctatggccaggccatgctgaaacaacggaacgggata
tataaatactatttcgaagaacaaaagcaatggaagaccatggtttttggcgagtctgaa
aaggcggggtggattgtggctgtcaccgcgcctctcggagagttgatgagtccgttggac
tccatcagaaattcggcaattgtcgggacattgttgatgctgctggctgttgccggtgtc
gttttctttatcgttggccttattgctaaggcaacacaatcgtctgtggatattctcgag
aaggtcgcggaaggcgatctggatatttccatccctgaaaagagcctgcagaaagtggac
gagatgggcgatatgtcgcgtgcgctgaatatgatgacgggcaaactcgcggaaaccatg
atctccattaatcaagccaccgaagaagtggcttcaggaagcaatgagctttcggtgacg
tctgagacgttggctgaaggagccaatacacaggctgctaatattgaggaggtttcttcc
agtgtggagcagatagtgagcagtattcgtcggaatgcagaaaacgcgacccagacacag
aagatcgcgttacaggtcgcaaacgacgctgaaattggtggcgctgccgtcttggaaacc
gtgaaagccatgaaggatattgccgagaggatcagcgtgatcgaagatattgcccgacag
accaacctgctggctttgaatgcggccattgaagccgcacgagccggtgaacatggcaag
ggattcgccgttgtcgcggcagaggtgcgtaaactcgcggagcatagcggcaatgcggcg
gcggatataagcgagctgtctgtttccagcgttgcaatagcggaaaaagccggtgaaatg
ctggacaagatcattcctgatatcaagcagacggctgaacttgtggatgagatcgctgct
gcgagcaatgaacagaatagtggcgcttcagagatcaatgattcgattcaacagctggat
cggatcatccaatccaatgcgtccgtttctgaggagatgtcgtccacaagccagcaattg
gctggacagagtgagttgctgcgttccgctgtcgcctttttcaggtttaatggacagcat
aatgctggggcgataggtgctgacacccatgttcgtgttgtggcttcgccccctcttgct
gcccttagagggcggtag
DBGET
integrated database retrieval system
