Pseudodesulfovibrio sediminis: PSDVSF_17330
Help
Entry
PSDVSF_17330 CDS
T08380
Name
(GenBank) hypothetical protein
KO
K03572
DNA mismatch repair protein MutL
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PSDVSF_17330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psef03400
]
PSDVSF_17330
DNA repair and recombination proteins [BR:
psef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
PSDVSF_17330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
BCS88491
LinkDB
All DBs
Position
complement(1816404..1818242)
Genome browser
AA seq
612 aa
AA seq
DB search
MTQTAEIRVLPAGLKNQIAAGEVVERPASVIKELVENSLDAGATRVDVTIEQGGRSLMVV
QDNGAGIQPHQLELAVTRHATSKIRDFKDLSAIGSFGFRGEALPSIASVSRFTMTSCAAG
AAEAAFIEVHAGTVADQGPAALAAGTRVEIRDLFANTPARLKFLKTESTENRRCQETLMR
TSLAHLGTGFSLTMGGREAFRLPADQALSARLAAFWPPAVCQGLSPFDFERNGYRVHGVA
GSPGTAQGRGNRILLFVNGRPVQDKLMLSAVRQAYKGMLLSREYPQIVLFLELPREEVDV
NVHPAKLEVRFIDEKQVFSAIRGGVMQALSQPGMELAGGFVGDRPHSGPPLTERPVHPAP
SGEPVKYSHRPDPMESAPKFSTYREFKSEYVPPRDLELPLPPSAGMAREPGAASSGMMRS
GLDSTRAAPLAGSGYTYLGQISDTYLVLREGDSLVLVDQHAAHERVILAAMRDARTKGDS
QPLAMPLEMNLHPSEADVLQDINEDLRSMGFIVEMDGPSKALVRGIPPTLDTGKAREYLA
DALAEKARGLDDLWTMMSCKTAIKANQPLAVDEALALLETWLMTPEREFCPHGRPVVLRW
NSADLEKMFKRK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacccagacagctgaaatacgtgttctgccagcagggttgaagaaccagattgcagcg
ggcgaggttgtggaacggcctgccagcgtgatcaaggagctggtcgagaactcccttgat
gccggggcgacccgcgtggatgtgaccatcgagcagggtggacgttcactgatggtggtg
caggacaacggggccggcattcagccgcaccagcttgagctggccgttaccagacatgcc
accagcaagattcgagatttcaaggatctgtccgccatcggttccttcgggttccggggt
gaggcgttgccgtccatcgcgtcggtctcccgttttaccatgacatcctgtgccgccggg
gctgccgaggccgcctttatcgaagtgcacgctggaactgtggccgaccaggggcctgcg
gccctggccgcagggacgcgggtggaaatccgtgatctttttgccaacactccggcacgg
ctcaaatttctcaagaccgaatccactgaaaatcggcgttgtcaggaaacgctcatgcgg
accagtctggcccatctcgggaccggcttttccctgaccatgggcgggcgcgaagccttt
cgccttccggctgatcaggcactttcggcacggctggccgcgttctggcctccggctgtg
tgccagggactttccccctttgatttcgaacggaacgggtatcgcgtccatggcgtggcc
ggttctccgggcactgctcagggccggggcaaccgcatcctgttgttcgtcaatggccgt
cctgtgcaggataagctcatgctgtccgccgtgcgtcaggcctacaagggcatgctcctg
tcgcgggaatatccgcagattgtgttgtttctcgaactgcctcgggaagaggtggacgta
aacgtgcatccggccaagctggaagtgcgtttcattgatgagaagcaggtcttttccgcc
atccggggcggggtgatgcaggccttgagtcagcccggcatggaactggccggcggcttc
gtgggcgatcgtccgcactctggcccgccgttgaccgagcgtcccgttcacccggcaccg
tccggggaaccggtgaagtacagccacagacccgatcccatggagtctgcaccgaaattt
tccacgtaccgcgagttcaaatcggagtacgttccgcccagggacctggagctgcccctg
cctccatcggcaggcatggcccgtgaacctggcgcagcctcctcaggcatgatgcggtcc
ggtctggattccaccagggcggccccccttgccggaagcggctatacctatcttggacag
atctcggatacctatcttgtgttgcgggaaggtgattctctggtgctggtggaccagcac
gccgcccatgagcgggttattctggcggccatgcgggacgcgcgcaccaaaggcgactcc
cagccgctggccatgccccttgaaatgaatctgcatcccagcgaagcggatgtgttgcag
gatatcaacgaagacctgcgctccatgggattcattgtcgagatggatgggccgtccaag
gcattggtacggggcattcctcctacattggatacgggcaaagccagggaatatctggct
gatgctctggctgaaaaggcccgggggctggatgatctgtggaccatgatgtcctgcaag
accgccatcaaggccaatcagccgctggctgtggatgaggcgctggccctgcttgaaaca
tggctcatgaccccggaacgggagttctgcccacacggtcgtcctgttgtcctgcggtgg
aactctgctgatctcgaaaaaatgtttaagagaaaataa
DBGET
integrated database retrieval system
