Pseudodesulfovibrio sediminis: PSDVSF_22650
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Entry
PSDVSF_22650 CDS
T08380
Name
(GenBank) NAD-dependent epimerase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00053
Ascorbate and aldarate metabolism
psef00520
Amino sugar and nucleotide sugar metabolism
psef00541
O-Antigen nucleotide sugar biosynthesis
psef01100
Metabolic pathways
psef01240
Biosynthesis of cofactors
psef01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
PSDVSF_22650
00520 Amino sugar and nucleotide sugar metabolism
PSDVSF_22650
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PSDVSF_22650
Enzymes [BR:
psef01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
PSDVSF_22650
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
adh_short
NAD_binding_4
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
BCS89023
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Position
complement(2368550..2369557)
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AA seq
335 aa
AA seq
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MKILITGAAGFIGFNLSRRLLAEGHTVVGLDNLNDYYDVELKKSRLAILKESAAFTHVNI
NLQDDQPMSDLFAEEQFTHVVNLAAQAGVRYSIENPKSYIDSNIVGFLNVLEGCRHNKVE
HLVYASSSSVYGKNTKMPLNPHEGVDHPMSLYAATKKSNEMMAHSYSSLYDLPTTGLRFF
TVYGPWGRPDMALFLFTKNILEEKPINVFNNGKMRRDFTYIDDIVEGVVRVVKNTATPNA
DWDGNNPDPCTSSVPYRVYNIGNNSVVELSRYIEVIEEVVGKKAIYNYMPMQPGDVPATE
ADVDDLIRDVGFKPNTTIEVGIKNFIDWYREYYNK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactcattaccggtgctgccggatttatcggtttcaatctttcccggcgactt
cttgcggaaggccacactgttgttggtctcgacaacttgaatgactattatgacgtggaa
ctgaagaaatcacgtcttgccattctcaaggaaagcgccgcgttcacgcacgtgaacatc
aatcttcaggatgatcagcccatgagcgatctgtttgctgaagaacaattcacgcatgtg
gtcaatctggctgctcaggctggcgttcggtattcaattgagaatcccaagtcctatatt
gactccaatattgttggtttcttgaatgttttggaaggttgcaggcataacaaggtagag
catctcgtgtatgcttccagtagctcggtctacggtaagaacaccaagatgccgctcaac
cctcacgaaggggttgatcatcccatgagtttgtacgcggctacaaagaaatcaaacgag
atgatggcgcactcctactccagcctctacgatctgccaacgaccggtctgcgcttcttc
acggtgtacggtccctggggacgtcctgacatggctctcttcctctttaccaagaatatt
cttgaagagaagcccatcaatgttttcaataatggaaagatgcgccgtgacttcacttac
attgatgacatcgtcgaaggtgttgtccgcgtggtcaagaatactgcgacccccaatgcg
gattgggatggcaataaccctgacccgtgcaccagttctgtgccctaccgtgtatacaac
atcggcaacaactctgtcgtggaactgtctcgttacattgaagtcatcgaagaagttgtc
ggcaaaaaggccatctataactatatgcccatgcagcccggtgatgttccggccactgaa
gcggatgtcgatgatctgatccgcgacgttgggttcaagccgaataccaccattgaagtc
ggtatcaagaattttatcgattggtatcgcgagtattacaacaagtag
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