Pseudodesulfovibrio sediminis: PSDVSF_24020
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Entry
PSDVSF_24020 CDS
T08380
Name
(GenBank) PAS domain-containing sensor histidine kinase
KO
K13598
two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:
2.7.13.3
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSDVSF_24020
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psef01001
]
PSDVSF_24020
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psef02022
]
PSDVSF_24020
Enzymes [BR:
psef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PSDVSF_24020
Protein kinases [BR:
psef01001
]
Histidine kinases
NtrC family
PSDVSF_24020
Two-component system [BR:
psef02022
]
NtrC family
NtrY-NtrX (nitrogen regulation)
PSDVSF_24020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HAMP
PAS
NtrY_N
HisKA
PAS_4
PAS_9
HATPase_c_5
PAS_8
PAS_7
Syntaxin-6_N
DUF1664
CrgA
DUF3671
Motif
Other DBs
NCBI-ProteinID:
BCS89160
LinkDB
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Position
2513276..2515465
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AA seq
729 aa
AA seq
DB search
MTPDPIRISPTTHRDKRRRKREYIFALIFLVLILGLTWAELKYLSGDYYLILNLLILNVV
LLLAMLFYVARNAVRLILDRRRKVLGSKLRTRLVLAFISLSLIPTALIYLVSVKFVQTSV
DYWFKGQVEESMEQALELGRAFYGSAQDRLERRGSVMIDEIVKQNYAWGGKSMDNYLSRK
FDEYDLSLVGVINPEGNEQNAHATAQWSQAWPEIKEKIDWQSLKADPRSWTTIIPKPGSD
LVLGVTPVDQGESGYLVIGETVGQGLLHRLDQIVRGLDEYKKLKTRKYPWKMNLYLTLGV
MALLIILGAIWFGFRLAKELSAPVQALAAGTERIGRGDLSVRLEDRSDDELGFLVQSFNR
MAEDLEQSQESVQQANERLAQQNQELERRGQYIEAVLNNITSGVISMDAEGRIGTVNTAA
EKILGIPGALLIGKISHHLLSGDFAKMMEDALSQLSAKAGGWQHQLDLPVRGKTIKVLVN
VVSLTNVGGREAGHVAVFEDITELEKIQRLAAWREVARRIAHEIKNPLTPIKLSAQRLQR
KYGPGIGESTFDECTGLIVNQVERLQNMVAEFSAYAKLPEVQPQPDYLAPLLEEVTGMFK
NTHLNIDWNLTFDTPIAELQFDRESIRKVLINLLTNAAEALKGGKDGRVDINASHDIKAG
KVIITVADNGPGLPKDSSRLFEPYYTEKRGGTGLGLTIVRSIISDHGGTVSARSGADGGT
VFVIELPDT
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcctgatcccatacgcatcagcccgaccacgcaccgggacaagcgacggcgtaaa
agagaatacatctttgccctgatttttctggtgcttattctcggtctgacttgggccgag
ctcaaatatctgagtggtgattactatctcatcctgaacctgctcatcctcaacgtggtg
ctgttgctggccatgttgttttatgtggcccggaacgcggttcgactcatcctggatcgc
cgccgcaaggtgcttggttccaagctcagaacccgtcttgttctggcctttatctccctt
tcgctcatacccaccgccctcatctatctggtctccgtgaagttcgtgcagacctcggtg
gactattggttcaaggggcaggtggaggaatccatggagcaggcgctcgaactcgggcgt
gcgttctacggctcggcgcaggatcgtctggaacggcgcggctccgtcatgatcgatgag
atcgtcaagcagaattatgcctggggcggcaagtccatggacaactatctgagcagaaaa
tttgacgaatacgacctcagtctggtgggagtcatcaatccggagggcaatgagcagaac
gcccatgccacggcgcaatggagtcaggcatggcccgagatcaaggaaaagatcgactgg
cagtccctcaaggcggacccgcgttcgtggaccacgatcatacccaagccgggcagtgat
cttgtccttggcgtcacccctgtggatcagggggagtcagggtatctggtcatcggtgaa
accgtggggcaggggttgctgcatcggctcgatcagatcgtgcgcggtctggatgaatac
aagaagctcaagacgcgcaaatacccgtggaaaatgaatctctatctgacgctcggggtc
atggccctgctcattattctgggtgccatctggtttggattccggcttgccaaggagctg
tctgccccggtgcaggccttggcggcaggaacggagcgtatcggacgcggtgatctttcc
gtgcgcctggaggaccggtccgatgacgaactcggttttttggtgcagtccttcaaccgt
atggccgaagatctggaacaatcccaggagtccgtgcagcaggccaatgaacggctggcc
caacagaatcaggagttggagcggcgcggacaatatatcgaggccgtgctcaacaatatc
acctccggcgttatttccatggacgcagaagggcgtatcgggacagtcaatactgcggcc
gaaaagattctcggcatcccgggtgcgctgctgatcggcaagatttcccatcacctgctt
tccggcgattttgccaagatgatggaggacgccctgagccagctttcggccaaggcggga
ggctggcagcatcaactggatcttcctgttcgcggcaagacgatcaaggtgctggtcaac
gtggtctccctgaccaatgtgggtggccgggaggctggccatgtggccgtgttcgaggat
attacggagctggagaaaatccagcggctggcggcctggcgtgaggtcgcccggcgcatc
gcgcatgagatcaagaatccgcttaccccgatcaagctttcggcccagcgacttcagcgc
aagtatggccccggcatcggcgagtccacttttgacgagtgcaccggtctcatcgtcaat
caggtggaacggctgcagaacatggtcgccgagttttccgcgtatgccaagctgccggaa
gtgcagccgcagccggattatctggctccactgctggaagaagtcacgggcatgttcaag
aatacccacctcaacatcgactggaatctcacttttgacacgcccattgccgagctgcaa
tttgatcgcgagtccattcgcaaggtgctcatcaatctgttgaccaatgcagccgaggcc
ctcaagggcggcaaggacgggcgcgtggatatcaatgcctcccacgacataaaggcgggc
aaggtcatcatcacggtggctgacaacggtccgggactgcccaaggactcctcccgcctc
tttgaaccgtactacaccgaaaagagggggggtaccggtcttgggctgaccattgtccgc
tccatcatctccgaccatggggggacggtcagcgcccggtccggtgcggacggcggtacc
gtatttgtcatagaactcccggacacttga
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