Pseudomonas sediminis: HNQ25_06045
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Entry
HNQ25_06045 CDS
T07154
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psej
Pseudomonas sediminis
Pathway
psej01501
beta-Lactam resistance
psej01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HNQ25_06045
01503 Cationic antimicrobial peptide (CAMP) resistance
HNQ25_06045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psej02000
]
HNQ25_06045
01504 Antimicrobial resistance genes [BR:
psej01504
]
HNQ25_06045
Transporters [BR:
psej02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HNQ25_06045
Antimicrobial resistance genes [BR:
psej01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HNQ25_06045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
QNH02291
UniProt:
A0A7G7RHN9
LinkDB
All DBs
Position
complement(1258727..1261870)
Genome browser
AA seq
1047 aa
AA seq
DB search
MSRFFIDRPIFAWVIALVIMLAGGLSILKLPINQYPSIAPPAVAIQVSYPGASAQTVQDT
VVQVIEQQLNGIDGLRYVSSSSNSDGSMEIIVTFEQGVNPDIAQVQVQNKLQLATPLLPQ
EVQQQGIRVTKSVRNFLMVIGVVSKDGSMTREDLSDYIVSNLQDPISRTKGVGDFQVFGA
QYAMRIWLDPAKLNSFQLTPVDVRSAIQAQNVQISSGQFGGLPASPGNQLNATIIGKTRL
QTPEEFRKILLKVQADGSQVRLGDIAKVELGGENYAINAQFNGLPASGLAVRLATGANAL
DTAKAVRETISNLEPFFPAGMEVVFPYDTTPVISASIEGVVHTLFEAIVLVFLVMFLFLQ
NLRATIIPTMAVPVVLLGTFGILAAFGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
REDGLSPKEATKKSMGQIQGALIGIGLVLSAVFLPMAFFGGSTGVIYRQFSITIVSAMAL
SVLVALIFTPALCATLLKPIDSDHHEAKRGFFGWFNRTFERGSNAYQRGVAGMIKRKAPY
LLLYLVIVIIMAWMFTRIPTAFLPEEDQGVLFAQVQTPSGSSAERTQVVVDEMRQYLLED
QASTVQSVFTVTGFNFAGRGQSSGMAFIMLKPWGERPGEENGVAALAQRAQMHFFSFRDA
MVFAFAPPAVMEMGNATGFNFFLQDQAGVGHQVMNEARDKFLKLANEHPVLDSVRANGLR
DEAQYQLLIDDERARALGLSLADINSTLSIAWGASYVNDFIDRGRVKKVYLQGVSDARMS
PEDLNKWYVRNDQGRMVPFSAFASGEWTYGAPKLARYNGVSAVEILGAPAPGYSTGDAMA
AVEEIASQLPQGVGYSWTGLSYEERLAGSQTTALFVISAIVVFLCLAALYESWSIPFSVM
LVVPLGIIGALLFTELRGLSNDVFFKVGLLTTIGLSARNAILIVEFAKAQYEQGMTFAEA
AIEACRMRLRPIIMTSLAFILGCLPLAIASGAGAGSKHAIGTGVIGGMLSAMILAIFWIP
LFYVVVCSIFEKKRPEPASEKEKEVLQ
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtccagattctttatcgaccggccgatcttcgcctgggtgatcgccctggtgatcatg
ctggcgggtggcctgtccatcctcaagctgccgatcaaccagtacccgagcatcgcgccg
cccgccgttgccattcaggtttcctacccgggcgcctcggcgcagacggtgcaggacacc
gtagtgcaggtgatcgagcagcagctcaacggtatcgacggcctgcgctatgtcagctcg
tcgagtaactccgacggcagcatggagatcatcgttaccttcgaacagggggtgaacccg
gatattgcccaggttcaggtgcagaacaagctgcagctggccaccccgctgttgccacag
gaagtccagcaacagggcatccgcgtcaccaagtcggtgcgcaacttcctgatggtcatc
ggtgtggtgtcgaaagacggcagcatgacccgtgaggacctgtccgactacatcgtctcc
aacctgcaggacccgatttcgcggaccaagggcgtcggcgacttccaggtgttcggtgcg
cagtacgccatgcgcatctggctcgatccggccaagctcaacagcttccagctgaccccg
gttgacgtgcgcagcgccatccaggcgcagaacgtgcagatctcctccggccagttcggc
ggcctgccagcgtcgccgggcaaccagctcaacgccaccatcatcggcaagacgcgcctg
cagaccccggaagaattccgcaagatcctgctcaaggtgcaggccgatggctcccaggtg
cgcctgggtgatatcgccaaggtcgagctgggtggtgagaactacgccatcaacgcgcag
ttcaacggtctgccggcatccggtctggcggttcgcctggccaccggggccaacgccctg
gacaccgccaaggcggtgcgtgaaaccatctccaatctcgagccattcttcccggccggc
atggaagtggtcttcccctacgacaccacaccggtgatctcggcctccatcgaaggggtg
gtgcacaccctgttcgaggccatcgtgctggtgttcctggtgatgttcctgttcctgcag
aacctgcgcgccaccatcatcccgaccatggcggtgccggtggtactgctgggtaccttc
ggcatacttgccgcgttcggtttttccatcaacaccctgaccatgttcgccatggttctg
gccatcggcctgctggtggacgacgccatcgtcgtggtggagaacgtcgagcgggtgatg
cgcgaggatggcctgtcgcccaaggaggcgaccaagaaatccatgggccagatccagggt
gcgctgataggcatcggcctggtgctctcggcggtgttcctgccaatggccttcttcggc
ggctccaccggggtgatctaccggcagttctccatcaccatcgtctcggccatggccctg
tcggtactggtggcactgatcttcacccctgcactgtgcgccactctgctcaagcccatc
gacagtgaccaccatgaggccaagcgcggcttcttcggctggttcaaccgcaccttcgag
cgcggcagcaatgcctatcagcgcggcgttgcgggcatgatcaagcgcaaggcgccgtac
ctgctgctgtacctggtgatcgtcatcatcatggcgtggatgttcacccgcattcccacc
gcgttcctgcctgaagaagatcagggcgtattgttcgcccaagtgcagacgccgtccggc
tccagtgccgagcgtacccaggtggtggtcgacgaaatgcgccagtacctgctggaagac
caagcgagcacagtccaatcggtgttcaccgtcaccggcttcaacttcgccggccgcggc
cagagctccggtatggccttcatcatgctcaagccgtggggcgaacgtccgggcgaggag
aatggcgtagccgcattggcgcaacgtgcgcagatgcacttcttcagcttccgtgatgcg
atggtgttcgccttcgccccgccggcggtaatggagatgggtaacgccaccggcttcaac
ttcttcctgcaagaccaggcgggcgtcggccatcaggtgatgaacgaggcacgtgacaag
ttcctcaaactggccaacgagcatccagtgctcgacagcgtacgtgccaacggcctgcgc
gacgaagcgcagtatcagttgctgatcgatgacgagcgcgcccgtgccctcggcctgtcg
ctggcggacatcaacagcaccctgtcgattgcctggggcgccagttacgtcaacgacttc
atcgaccgtggtcgggtgaagaaggtctacctgcaaggcgtgtccgacgcacgcatgagc
ccggaagacctgaacaagtggtacgtgcgcaacgaccagggccgcatggtgccgttcagt
gccttcgccagcggtgaatggacttacggtgcaccgaagctggcgcgctacaacggcgtg
tcggcggtggaaatcctcggcgccccggcgcccggctacagcaccggtgatgccatggcc
gcggtcgaggaaatcgcctcgcagttgccacagggcgtcggctactcctggaccggtctg
tcctacgaggagcgcctggcaggctcgcagaccactgcactattcgtgatctccgccatc
gtcgtgttcctgtgcctggcagcactctacgagagctggtcgatcccgttctcggtgatg
ctggtggtgccgctggggatcatcggcgccttgctgttcaccgaactgcgcgggctgtcc
aacgacgtgttcttcaaggtcggcctgctcaccaccatcggtctgtcagcgcgtaacgcg
atccttatcgtcgagttcgccaaggcccagtacgagcaaggcatgaccttcgctgaagcc
gccatcgaagcctgccggatgcgtctgcgcccgatcatcatgacctcgctggcgttcatc
ctcggctgtctgccgctggccatcgccagtggtgccggcgcgggcagcaagcacgccatc
ggcaccggggtgatcggcggcatgctcagcgcgatgatcctggcgatcttctggattccg
ctgttctacgtagtggtctgctcgattttcgagaagaagcgccccgagccggccagtgaa
aaagagaaggaggtactgcaatga
DBGET
integrated database retrieval system
