Pseudomonas sediminis: HNQ25_07755
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Entry
HNQ25_07755 CDS
T07154
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psej
Pseudomonas sediminis
Pathway
psej03410
Base excision repair
psej03430
Mismatch repair
psej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HNQ25_07755 (recJ)
03430 Mismatch repair
HNQ25_07755 (recJ)
03440 Homologous recombination
HNQ25_07755 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psej03400
]
HNQ25_07755 (recJ)
DNA repair and recombination proteins [BR:
psej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HNQ25_07755 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HNQ25_07755 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HNQ25_07755 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
Motif
Other DBs
NCBI-ProteinID:
QNH02602
UniProt:
A0A7G7RIK0
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All DBs
Position
1628451..1630160
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AA seq
569 aa
AA seq
DB search
MRIEARPLPAQLPDLGNLPPLLTRLYAARGVQSAEELDKGLARLIPYQQLKGIDAAIELL
VQALEQRQRILIVGDFDADGATASSVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALERQPDLLLTVDNGISSVDGVAAAKAAGLTVLVTDHHLPGPELPAADAIVNPNQPGCEF
PSKAMAGVGVMFYVLLALRARLRETGWFASRTEPNLGELLDLVALGSVADVVPLDANNRI
LVHQGLARIRAGRARPGLRAILEVAGRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLCDDEALARDMAVQLDQLNQDRKAIEQGMQREALAQLKDLSLDDMPFGLCLFEPDWHQG
VIGILASRLKERYHRPAIAFADAGEGMLKGSARSVPGLHIRDALDAVAARHPGLISKFGG
HAMAAGMSLPQANFGAFAAAFDAEVRRQLCEDDLTGRLLSDGQLDATEFHLELARALRNA
GPWGQHFPEPLFHGVFQIVNQRIVGERHLKLVLKTECGSVQLDGIAFNIDREVWPNPTLR
WAEVAYKLDLNEFRGNETVQLMVAHIAPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaagcccgtcccttacccgcacaactgcctgacctgggcaatctgccgcct
ttgctgacccgtctctacgccgctcgcggcgtgcagtctgccgaagagctggacaagggg
ctggcgcggttgatcccttaccagcagctcaagggcatcgacgccgcgatcgaactgctg
gtgcaggcgcttgaacagcgccagcgcattcttatcgtcggtgacttcgatgccgatggc
gccaccgcaagttcggtcggtgtactcggcctgcgcctgctcggcgcggcgcatgtcgat
tacctggtgccgaaccgtttcgagtatggctacggcttgaccccggagatcgtcgccgtg
gctctcgaacgccagcctgatctgctgctgactgtcgacaacggcatttccagcgtcgat
ggcgtggcagccgccaaggccgccgggctgacggtgctggtcaccgaccaccacctgcca
gggccggaattgccggcggccgatgcgatcgtcaaccccaaccagccaggctgcgagttt
ccgagcaaggccatggctggtgtcggggttatgttctatgtgctgctggcgctgcgtgca
cggttgcgcgagaccggttggttcgccagccgtacggagccgaacctgggcgagctgctc
gacttggttgcgctgggcagcgtcgccgacgtggtaccgctggatgccaacaaccgcatc
ctggtgcaccagggtctggcgcgtattcgtgccggccgggcaaggccgggcctgcgtgcg
attctcgaagtcgccgggcgcgatcatcggcgtatcacctccaccgatctcggtttcatc
ctcggcccacggctgaatgcggccgggcgcctggacgacatgagcctcggtatcgaatgc
ctgctctgcgacgacgaagccctggcccgtgacatggcggtgcagctcgaccagctcaac
caggatcgcaaggccatcgagcagggcatgcagcgtgaggcgctggcccagctcaaggat
ctgtcgttggacgacatgccattcggcttgtgcctgttcgagccggactggcaccagggg
gtgatcggcatcctcgcttcgcgcctgaaagagcgctatcaccgtccggccatcgccttc
gccgatgctggcgagggcatgctcaagggctcggcacgttcggtgccggggctacatatc
cgcgatgcgctggacgccgtggcggcgcgtcatccggggctgatcagcaagttcggcggg
catgcaatggctgccgggatgtcactgccgcaagccaactttggcgcctttgctgctgcc
ttcgacgccgaagtacgccgccagttgtgcgaggacgacctgactggtcggttgctgtcc
gatggccagctcgatgccactgagttccacctggaactggcccgcgctctgcgcaacgcc
gggccctggggccagcattttcccgaaccgctgttccatggcgtgtttcagatcgtcaat
cagcgcatcgtcggtgaacgtcacctgaaactggtgctaaagaccgaatgcggcagcgtg
cagctcgatggcatcgccttcaacatcgatcgcgaggtctggcccaacccgacgctgcgc
tgggccgaagtggcgtacaaactcgatctcaacgagtttcgtggcaatgaaaccgtgcaa
ctgatggtggcgcatatcgccccgcgttaa
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