Pseudomonas sediminis: HNQ25_20115
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Entry
HNQ25_20115 CDS
T07154
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psej
Pseudomonas sediminis
Pathway
psej01501
beta-Lactam resistance
psej01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HNQ25_20115
01503 Cationic antimicrobial peptide (CAMP) resistance
HNQ25_20115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psej02000
]
HNQ25_20115
01504 Antimicrobial resistance genes [BR:
psej01504
]
HNQ25_20115
Transporters [BR:
psej02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HNQ25_20115
Antimicrobial resistance genes [BR:
psej01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HNQ25_20115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QNH00570
UniProt:
A0A7G7RCR8
LinkDB
All DBs
Position
complement(4261867..4265004)
Genome browser
AA seq
1045 aa
AA seq
DB search
MISRFFIDRPVFATVISIVIVLAGLAAMRSLPIAQYPEILPPQVSVSAAYPGASSQVIAE
TVAAPLEQEINGVENMIYQLSNSSSSGAMSLTVYFAVGTDPDQATINVNNKVQAALAKLP
EEVRRQGVKVEKKSSDILQVITLYSPDGSRDPIFISNYALINVIDELKRLKGVGDASQFG
SKDYSMRIWLRPDKLAQYNLTPTDVVNAIREQNSQFAAGSFGQQPLKEPQDFTYTVTTQG
RFTDPKEFESVILRTDDTGASLLLKDVARVELGAQDYSLVTTLNGQQNAAFGIYLQPGAN
ALDTAEAVERTMQRLAKRFPEGIAYKIPYDTTKFVQVSITEVIHTFFEALVLVVLVVFIF
LQNWRATLIPVLAIPVSLVGTFAGMYLLGFSINLLTLFGMVLAIGIVVDDAIVVIENVER
VMRTQGLNARDASIKAMEEVTGPIIAIVLVLCAVFIPVGFLGGLAGQMYKQFAITIAVSV
VISGIVALTLSPALCALLLKPGHHEPAAPFRVFNRFFDKATAGYGAGVRFFLKRSLVGLL
LFGGMIALIMLLFSRVPGSLVPDEDQGYVINAYYLPPAASLNRTEALSGAVSQQLMEHPA
VADVVTFAGFDVLTFGVRSNAGVSFVPLKDWSERTTDELDARNLTREFMGMGAAQKDGLV
LSFNPPPITGMSTTGGFESFIQDRSGGSVEQLGEKVQAFVAAASKRPELAGIQSTFSANV
PQYYIDLDRTKTRALGVSVSDVFTAMQATFGSYYVNDFTLYGRTWQVSLQSESEFRRKPE
DLGQVYVRSSSGDLVPLSTLLRVRRILGPDSYDRFNVYPSAKVLGGPAPGYSSGQALAAM
QEVADEVLGEDYSLGWIGSAYQELATQGSGTQAFVFGLILVFLILAAQYERWTLPLAVVT
AVPFAVFGAILAVWLRGIQNDVYFQVGLVTLIGLAAKNAILIVEFAVLLRAEGKSIFESA
LEAAKLRFRPIVMTSLAFILGCVPLAISSGAGSASRHSIGTGVIGGMLAATLLATFVIPM
FYLLVETAAQRVSRRGKAREEEQPH
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgcgctttttcatcgaccgtccggtgttcgccaccgtcatctccatcgtcatc
gtgctcgccggcttggcggcgatgcgctcgttgcccatcgcccagtatccggaaatcctg
ccaccgcaggtatcggtcagcgccgcttatcccggtgccagctcacaggtcattgccgaa
accgtggcggcgccgctggagcaggagatcaacggcgtcgagaacatgatctaccagctg
tccaactcctccagcagtggggcgatgagcctgacggtgtacttcgcggtcggcaccgac
ccggaccaggccaccatcaacgtcaacaacaaggtgcaggcagcgttggccaagctgccg
gaagaagtgcgccgccagggtgtgaaggtggagaagaagtcttccgacatcctccaggtg
atcaccctctattcgccggatggttcgcgcgacccgatcttcatcagcaactacgcgctg
atcaacgtcatcgacgaactcaagcgtctcaagggcgttggcgatgccagccagttcggt
tccaaggactattccatgcgcatctggctgcgcccggacaagctggcgcagtacaacctc
acgcccaccgatgtggtcaatgccattcgcgagcagaactcgcagtttgccgccggcagc
tttggccagcagccgttgaaggagccacaggacttcacctacaccgtcaccacgcaaggg
cgtttcaccgacccgaaggagttcgagagcgtcatccttcgtaccgacgataccggtgcc
agcctgctgctcaaggatgtggcgcgggtcgagctgggcgcccaagactactcgctggtc
accaccctcaatggccagcagaacgccgctttcggcatctacctgcagcccggcgccaac
gccctggacaccgccgaagcggtcgaacgcaccatgcagcgtctggccaagcgcttcccc
gagggcatcgcctacaagatcccctacgacaccaccaagttcgttcaggtctcgatcact
gaggtgatccacactttcttcgaggcgctggtgctggtggtgttggtggtgttcatcttc
ctgcagaactggcgcgccacgctgattccggtgctggcgattccggtatcgctggtcggc
acctttgccggcatgtacctgctgggcttctccatcaacctgctgacgttgttcggtatg
gtgctggccatcggcatcgtggtggacgatgccatcgtggtgatcgagaacgtcgagcgg
gtgatgcgcacgcaggggctgaatgcgcgagatgcctcgatcaaggcgatggaggaggtg
accgggccgatcattgccatcgttctggtgctgtgcgcggtgttcataccggtaggcttt
ctcggcggtctggcggggcagatgtacaagcagttcgcgatcaccatcgcggtgtcggtg
gtgatttccggcatcgtcgcgctgacgctttcccctgcgctctgcgcgctgctgctcaag
cctggccaccatgaaccggcagcaccattccgtgtattcaaccgtttcttcgacaaggcc
accgcgggctatggcgcgggggtgcgcttcttcctcaagcgttcgctggtcggcctgctg
ctgttcggcgggatgatcgcgctgatcatgctgctgttctcacgggtgcccggctcgctg
gtgcccgatgaggatcagggctacgtgatcaacgcctactacctgccgccggccgcttcg
ctcaatcgcaccgaggcgctgagcggggcggtgagccagcagttgatggagcatccggca
gtggcggatgtcgtgaccttcgccggtttcgatgtgctcaccttcggcgtgcgcagcaac
gccggggtgtccttcgtgccgctcaaggactggagcgaacgcaccacggacgagctcgat
gcacgcaatctgacgcgcgaattcatgggtatgggagctgcgcagaaggatggtctggta
ttgtcgttcaatccaccaccgatcaccggcatgagcaccaccggtggcttcgagtcattc
attcaggaccgctccggcggcagcgtcgagcagctcggtgagaaggtccaggccttcgtc
gcggcggctagcaagcggccagagctggccggcattcagagcaccttcagcgccaacgtg
ccgcagtactacatcgacctggatcgcaccaagacgcgggcactgggcgtcagcgtcagc
gatgtgttcaccgcgatgcaggcgaccttcggcagttattacgtcaacgatttcaccctc
tatgggcgaacctggcaggtcagcctgcagtccgagtcggagttccgccgcaagccggaa
gatcttggccaggtctacgtacgttccagcagtggcgatctggtgccgctgtcgaccctg
ctgcgggtgcggcgcatcctcgggccggattcctacgaccgtttcaacgtctatccctcg
gccaaggtgcttggcggtccggcgccgggttacagctccgggcaggcactggcggcgatg
caggaggtggccgatgaggtattgggcgaggactacagcctcggctggatcggctctgcg
tatcaagagctggcgactcagggttcgggcacccaggccttcgtcttcggcctgattctg
gtgttcctgattctcgccgcgcagtacgagcgctggacgctgccgttggcagtggtcacc
gccgtgccgttcgcagtgttcggcgcgattctcgcggtgtggctgcgcggcattcagaac
gacgtgtacttccaggtcggcctggtcaccctgatcggtctggcagcaaagaacgccatc
ctcatcgtcgagttcgccgtgttgctgcgtgccgagggcaagagcatcttcgaatcggcg
ctggaggcggccaagctgcgtttccgtcccatcgtgatgacttcgctggcgttcattctc
ggctgcgtaccgctggccatcagctccggcgccggctcggccagtcgtcactccatcggc
accggggtgatcggcggcatgctcgcggcaaccctgctggccacgttcgttatcccgatg
ttctatctgctggtggaaacggcagcgcaacgggtgagccggcgcggcaaggccagggag
gaagaacaaccgcattga
DBGET
integrated database retrieval system
