Paraoerskovia sediminicola: GCM125_12330
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Entry
GCM125_12330 CDS
T09128
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00052
Galactose metabolism
psek00511
Other glycan degradation
psek00600
Sphingolipid metabolism
psek01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
GCM125_12330
09103 Lipid metabolism
00600 Sphingolipid metabolism
GCM125_12330
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
GCM125_12330
Enzymes [BR:
psek01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
GCM125_12330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
BDZ41934
LinkDB
All DBs
Position
complement(1262896..1265787)
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AA seq
963 aa
AA seq
DB search
MRARPGATGDRAQSLDGTWSFRLFDSPDVVPAESVAIDEAGGQWQSIAVPGSWPVQDVGD
RPHYTNIQMPFPEPPPQLPEHNPAGVYRTTFDVPSGWADERIVLHIGAADSVHGVYLNGT
FVGYGTDARLASEYDVTEAARPGANVLAVVVVRYSAHSFVEDQDGWWLAGLHRSVRVEAR
PRVSLADLDARADRDPETGVGSLDVRATVDFGDHGLALEGYSVRTTLVAADGTPASEPRD
AVVPHLASKTYTFSGHIAKTRWDDLDVEAWSAESPTLYTVEAQLLDPSGAVVDRTAVRVG
FRRVEIEGADFLVNGKRVWIFGVNRHDHHPDTGATVTVDDMRADLVAMRRMNINAIRTSH
YPNDPAFYDLCDELGFYVVDEANIESHAYNWYVCGDPRYRATWLERGARMVARDRNHPCV
VQWSLGNESGYGVNHDALAGWIRRADRSRPVHYEDAIRFSGWADGGHHGSDVVCPMYPAI
AEIHAYGQQVAAGEADRPLIMCEYSHAMGNSNGSLADYWDVITTTPGLQGGFIWEWKDHG
LRQRLDDGSTRLAYGGQFGDTPHDANFVADGLVSADVVPHPAAAEVTWVHRPVVSTLVDG
GVQVTNRRFFTGLDDLVAGWELVVDGVPVGSGALDVAEVGPGESVVVPLPPAAAELQPDG
DGRVLLTVTWRTRADAWHAPAGSAVAWDQLTLRDAPLRAGGASSDAGDLGGLEPGTLGEA
RPNVWRAATDNDGFKLLEDLVRVREMGSPTLIQWRDAGIDTRPAEEIVGYSSEVVDLPAG
QEVRHRFDVPEDAVDLPRVGVLLTVDPRFDELRWIGRGPHENYPDRRRSATVGSWTTGVE
ASPYLLPQEFGLRTETTQVELVDSSTGDRIRFTTLGDPFCWSATRHTPAALFAAVNDSDL
VDDERLVVCLDAAHRGVGTGSCGPDVLPQYRLGAGTYELAYRVEYLRPAESLTGEENSMR
RGM
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcccgcccgggtgccaccggtgaccgggcgcagtccctcgacggcacgtggtcg
ttccggctgttcgactccccggacgtcgtcccggcggagtccgtggcgatcgacgaggcg
ggtgggcagtggcagtcgatcgcggtgccggggagctggcccgtccaggacgtcggggac
cgcccgcactacacgaacatccagatgccgttccccgagcccccgccgcagctgcccgag
cacaatccggccggggtgtaccgcacgacgttcgacgtcccgtccggatgggcggacgag
cggatcgtgctccacatcggtgccgccgacagcgtgcacggggtctacctcaacgggacg
ttcgtcgggtacgggacggacgcgcgcctcgccagcgagtacgacgtgaccgaggccgcg
cggccaggggccaacgtgctcgccgtcgtcgtcgtccggtactccgcgcacagcttcgtc
gaggaccaggacgggtggtggctcgccggcctgcaccggagcgtgcgggtggaggctcgc
ccccgggtgtcgctggccgacctcgacgcccgcgccgaccgcgaccccgagactggtgtg
ggttcgctcgacgtgcgcgccaccgtcgacttcggtgaccacgggctcgcgctcgagggg
tacagcgtccgcacgacgctcgtcgcggccgacgggaccccggcttcggagccgcgggac
gccgtcgtgccccacctggcctcgaagacctacacgttctcgggtcacatcgccaagacg
cggtgggacgacctggacgtcgaggcctggtcggccgagagcccgaccctctacacggtc
gaggctcagctcctcgacccgagcggcgccgtcgtcgaccggacggcggttcgggtcggc
ttccgccgggtggagatcgagggggccgatttcctcgtcaacgggaagcgtgtgtggatc
ttcggcgtcaaccgccacgaccaccaccccgacaccggcgcgaccgtgacggtcgacgac
atgcgcgccgacctcgtggccatgcgccgcatgaacatcaacgcgatccgcacgtcgcac
tacccgaacgacccggcgttctacgacctctgcgacgagctcgggttctacgtcgtcgac
gaggccaacatcgagtcgcacgcctacaactggtacgtctgcggcgacccccggtaccgc
gcgacctggctcgagcgcggcgcccggatggtggcccgcgaccgcaaccacccctgcgtc
gtccagtggagcctcggcaacgagagcggctacggcgtcaaccacgacgcgctggccggc
tggattcgccgggccgaccggtcgcggccggtgcactacgaggacgcgatccggttctcc
gggtgggcggacggcggccaccacggcagcgacgtcgtctgcccgatgtacccggcgatc
gcggagatccacgcctacgggcagcaggtcgcggccggtgaggcggaccgcccgctgatc
atgtgcgagtactcgcacgcgatgggcaacagcaacggctccctggccgactactgggac
gtcatcaccaccacccccggcctccagggcgggttcatctgggagtggaaggaccacggc
ctgcggcagcgcctcgacgacggctcgacgcgcctcgcctacggcggtcagttcggcgac
accccgcacgacgcgaacttcgtcgcggacgggctcgtctcggccgacgtcgtcccgcac
cctgccgcggccgaggtcacctgggtgcaccgcccggtcgtgagcacgctggtcgacggt
ggcgtgcaggtcacgaaccgccggttcttcaccggcctcgacgacctcgtggccggctgg
gagctggtggtcgacggcgtgccggtcggctcgggtgcgctcgacgtggcggaggtcggg
ccgggggagagcgtcgtcgtcccgctcccgcccgcagccgccgagctccagcccgacggc
gacgggcgggtcctgctgaccgtcacctggcgcacgcgcgccgacgcgtggcacgcccct
gccgggtcggcggtcgcctgggaccagctcacgctccgggacgcgccgctccgggccggc
ggggcgtcgtcggacgccggtgacctgggcgggctcgaacccgggacgttgggcgaggcc
cgaccgaacgtctggcgtgccgcgaccgacaacgacgggttcaagctgctcgaggacctg
gtgcgggtgcgcgagatgggctcacccacgctcatccagtggcgggacgccgggatcgac
acccgccctgccgaggagatcgtcgggtactcgtccgaggtcgtggacctgccggcgggc
caggaggtgcggcaccggttcgacgtgcccgaggatgctgtcgacctgccgcgcgtgggc
gtgctgctgacagtggacccgcggttcgacgagctccgctggatcgggcgtggaccccac
gagaactatccggaccgccggcggtcggcgaccgtgggctcgtggacgaccggcgtcgaa
gcctccccgtacctgctgccgcaggagttcgggctgcgcaccgagacgacacaggtggag
ctggtcgactcctcgactggcgaccgcatccggttcacgacgctgggcgacccgttctgc
tggtcggcgacgcgccacacgccggccgcgctcttcgccgcggtgaacgacagcgacctc
gtcgacgacgaacgcctcgtggtctgcctcgacgccgcgcaccgcggcgtcggcacgggg
tcgtgcggaccggacgtgctgccgcagtaccgcctcggtgcagggacgtacgagctggcg
taccgcgtggagtacctgcgaccggccgagagcctcactggagaagaaaactcgatgcga
aggggaatgtga
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