Paraoerskovia sediminicola: GCM125_21430
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Entry
GCM125_21430 CDS
T09128
Name
(GenBank) DTDP-4-dehydrorhamnose 3,5-epimerase RmlC
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00521
Streptomycin biosynthesis
psek00523
Polyketide sugar unit biosynthesis
psek00541
O-Antigen nucleotide sugar biosynthesis
psek01100
Metabolic pathways
psek01110
Biosynthesis of secondary metabolites
psek01250
Biosynthesis of nucleotide sugars
Module
psek_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GCM125_21430
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GCM125_21430
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GCM125_21430
Enzymes [BR:
psek01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GCM125_21430
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BDZ42844
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Position
complement(2246607..2247158)
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AA seq
183 aa
AA seq
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MFLEWFTDSSFAEVTGHSFDLAQANLSVSAAGVLRGVHYADVPPGQAKYVTCPKGAVIDV
VVDIRVGSPTFGTWDSVLLDDVDRRAIYLSEGLGHAFMSLEDGSTVLYLCSTGYAPEREH
GIHPLDPELGITWPTTARDGSPLEPQLSAKDEDASSLAEARAAGLLPDADTVARFVSTLT
RRD
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgttcctcgagtggttcacggacagctccttcgccgaggtgaccggacactcgttcgat
cttgcccaggcgaacctgtccgtctccgccgccggcgtgctgcgcggagtccactacgcc
gacgtcccgcccggtcaggccaagtacgtgacgtgcccgaagggcgcggtcatcgacgtc
gtcgtcgatatccgtgtcgggtcgccgaccttcggtacctgggactcggtgctgctcgac
gacgtcgaccggcgggcgatctacctgtccgaggggctcggccacgcgttcatgtcgctc
gaggacggctcgacggtgctgtacctctgctcgaccgggtacgcgccggaacgcgagcac
gggatccacccgctcgaccccgaactcgggatcacctggcccacgacggcgcgggacggc
agcccgctcgagccgcagctctcggccaaggacgaggacgcttcctcgctcgccgaggcc
cgggccgccggactgctgccggacgcggacaccgtggcacggttcgtcagtaccctgacg
cgtcgcgactga
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