Paraoerskovia sediminicola: GCM125_23460
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Entry
GCM125_23460 CDS
T09128
Symbol
lysS_2
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GCM125_23460 (lysS_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psek01007
]
GCM125_23460 (lysS_2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psek03016
]
GCM125_23460 (lysS_2)
Enzymes [BR:
psek01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GCM125_23460 (lysS_2)
Amino acid related enzymes [BR:
psek01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GCM125_23460 (lysS_2)
Transfer RNA biogenesis [BR:
psek03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GCM125_23460 (lysS_2)
Prokaryotic type
Other AARSs
GCM125_23460 (lysS_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BDZ43047
LinkDB
All DBs
Position
complement(2468843..2472268)
Genome browser
AA seq
1141 aa
AA seq
DB search
MPTPDASHAQRSPNDATSAPHPTADPTPGSSQGSVPGPVQAPPVPRWADAVARWTARIVE
VYLVWLVISVPLHLIAPGTTNRISSALGILNIPTSPSLFSIVLVLLIANGLRRRLRAAAL
FVIIVWLAPVILAGLVFAIAVALDADVSGSGLDGTFWAAVALATVSFVVLTAARRAFPAR
VVPGAFWRALLVLLAFVAASVVVSFALLEVVPSTVDGFANRLQWALSVSVGTSPHDAPFV
ADGTAPAWLHLVGGLISAVGLALAIGTFLRGAAADPRHEADVDLAVRRLMLENPSDDSLE
YFATRDDRQAVFSADGRAAVSYRVVAGVALAAGDPVGDPLRWDAAIERWLATARSYGWTP
AVLAASEAGARAFESAGLHPAVMGDEAILETRSLDLAAPSMRAVRHAVARPQKAGYTVRV
RRQSEIPTSELTELTRLVEEWRHGEVERGFSMALDRLGDARDPRTTVVTAHDEDGTPRGL
LSFVPWGRRGLSLDYMRRSPEAVSGVTELMITTLATEGRGSGVERISLNFAMFREIFESG
TKVGASMVQRSTRRVLLLASRWWQLDSLYRSNQKYEPTWRTRYLCYGSATELTPVLVAAG
QAEGFLPSFPRLFRRRDHAAVLDRPDIAERVADRVRAQEAELLTLTAPERKLTDQEAARH
AKLDVLREAGMEPYPVGVPRTTSLAEARALAGADDATDNDPQTISVVGRVVRSRDLGGVK
FAVLRERTDELQVMLTEDRPEARPDLWSAVVDLADHVSVTGTMTRSRTGETTLHVESWTM
ASKSLKAPPDKRRGLTDPEAKMRLRHVDLALNDTASRTLRGRSTAVRSLRESLATRGFIE
VETPILQRVHGGANARPFNTHINAYDLDLYLRIAPELYLKQLAIGGIDRVFELGRNFRNE
GADATHNPEFTSLEAYQAFGDYTTMRELTREMIVEAAIAVHGEPVSKRPDGTVVRLDGDW
PVVGVHEAISRAAGEEVSPDTPIERVRALCDGFDVHAPDDATHGALITELYDELVEGPTQ
EPTFYTDFPVETSPLTRVHRTDPRLAERWDLVAFGAELGTAYSELVDPVDQRKRLTEQSL
LAAAGDPEAMEVDESFLSALEFAMPPTGGLGIGVDRVYMMLIGASIRETLAFPFVKPSAR
G
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaccggacgccagtcacgcccagcgcagcccgaacgacgcgacgtcggctccg
cacccgaccgcagacccgactccgggctcgtcccagggctccgtcccgggccctgtccag
gccccgcccgtcccacgctgggccgacgcggtcgcccgctggaccgcgcggatcgtcgag
gtctacctcgtctggctggtcatctcggtcccgttgcacctgatcgctcctggcacgacg
aaccggatctcgagcgccctcgggatcctcaacatcccgacgtcgccgagcctgttctcg
atcgtcctggtgctcctcatcgccaacgggctgcgccgacggctgcgagcggcagcactg
ttcgtcatcatcgtctggctcgcacccgtcatcctcgccggcctcgtcttcgcgatcgcc
gtcgcactcgacgccgacgtctcggggtccggcctcgacggcaccttctgggcggcggtg
gcgctcgcgaccgtgtcgttcgtggtcctgaccgccgcgcggcgggcgttccccgcgcgc
gtcgtcccgggtgcgttctggcgcgcgctcctcgtgctcctggccttcgtcgcagcctcg
gtcgtcgtgtcgttcgcgctgctcgaggtcgtcccgtcgacggtcgacggcttcgcgaac
cgcctgcagtgggctctgtcggtctcggtcggtacgtccccgcacgacgcaccgttcgtc
gccgacggcaccgcccccgcgtggctgcacctcgtcggcggcctcatctcggccgtgggt
ctcgcgctggcgatcggcacgttcctccgtggtgccgcggcggaccctcggcacgaggcc
gacgtcgacctcgccgtgcgacggctcatgctcgagaacccgtcggacgactcgctcgag
tacttcgcgacccgtgacgaccgccaggcggtcttctcggcggacggccgcgcggcggtc
tcgtaccgcgtcgtcgccggcgtagccctcgccgcgggagaccccgtcggcgacccgctg
cgctgggacgcggcgatcgagcgctggctcgcgacggcccgctcctacggctggacgccc
gcggtgctcgcggcgagcgaggcgggcgcccgcgccttcgagtcggcaggcctgcacccg
gcggtcatgggcgacgaggcgatcctcgagacccgcagcctcgacctcgcggcaccgtcg
atgcgggccgtgcgccacgccgtcgcgcgcccccagaaggccggctacaccgtccgcgtc
cgccgtcagtcggagatcccgacgagcgagctcacggagctcacgcggctcgtcgaggag
tggcgccacggcgaggtggagcgcggattctcgatggctctggaccggctcggcgacgcc
cgcgacccccgcacgacggtcgtcacggcgcacgacgaggacggcacgccgcgcggcctc
ctgtccttcgtcccctggggccgtcgaggcctgtccctggactacatgcgccgctccccc
gaggccgtcagcggggtcaccgagctcatgatcacgacgctcgcgaccgagggccgcggg
tcaggcgtcgagcgcatctcgctcaacttcgcgatgttccgcgagatcttcgagagcggg
accaaggtcggcgcgtcgatggtgcagcgcagcacccgacgggtgctcctgctcgcctcg
cggtggtggcagctcgactcgctgtaccggtcgaaccagaagtacgagccgacctggcgc
acccggtacctctgctacgggtccgcgacggagctgacgccggtgctcgtcgccgcaggt
caggccgagggcttcctgccctcgttcccccgcctgttccggcgccgcgaccacgccgcg
gtcctggaccggccggacatcgccgaacgtgtcgcggatcgggtgcgcgcccaggaggcc
gagctcctgacgctcacggcgcccgagcgcaagctcaccgaccaggaggccgcccggcac
gcgaagctcgacgtgctgcgcgaggccggcatggagccgtaccccgtcggcgtgcctcgg
acgacgtccctcgccgaggcgcgagccctcgccggtgccgacgacgccaccgacaacgac
ccgcagaccatctcggtcgtcggccgcgtggtccgttcccgcgacctgggcggggtcaag
ttcgccgtcctgcgcgaacgcacggacgagctccaggtcatgctcaccgaggaccggccc
gaggcgcgaccggatctctggagcgccgtcgtcgacctcgccgaccacgtgagcgtcacc
gggacgatgactcggtcccgcaccggcgagacgaccctgcacgtcgagtcgtggaccatg
gcgtcgaagtcgctcaaggctccgccggacaagcgccgcggcctcaccgaccctgaggcg
aagatgcgcctgcgccacgtcgacctggccctgaacgacacggcgagccgcacgctgcgc
ggccgcagcaccgccgtccgctccctgcgcgagtccctcgccacccgcgggttcatcgag
gtcgagacgccgatcctccagcgggtccacggcggggcgaacgcccgaccgttcaacacc
cacatcaacgcctacgacctcgacctctacctgcgcatcgcacccgagctgtatctcaag
cagctcgcgatcggcgggatcgaccgggtcttcgagctcggtcgcaacttccgcaacgag
ggtgccgacgcgacccacaacccggagttcacatccctcgaggcctaccaggcgttcggc
gactacacgacgatgcgtgagctcacgcgcgagatgatcgtcgaggccgcgatcgccgtc
cacggcgagcccgtgtccaagcgcccggacgggaccgtcgtccgcctcgacggcgactgg
ccggtcgtcggcgtccacgaggccatctcccgtgccgccggcgaggaggtctcgcccgac
accccgatcgagcgggtccgcgccctgtgcgacgggttcgacgtgcacgcgccggacgac
gccacgcacggcgcgctcatcaccgagctgtacgacgagctcgtcgagggtcccacccag
gagcccaccttctacacggacttccccgtcgagacctcaccgctgacccgcgtccaccgc
acggacccgcggctcgcggagcgctgggacctcgtggcgttcggcgcggagctcggcacc
gcgtactcggagctcgtcgaccccgtcgaccagcgcaagcggctcaccgagcagtcgctg
ctggccgccgcgggcgaccccgaggcgatggaggtcgacgagtcgttcctctcggcgctc
gagttcgcgatgccgccgacgggcgggctcggcatcggtgtcgaccgcgtctacatgatg
ctcatcggcgcgagcatccgcgagacgctggcgttccccttcgtcaagccgtcagcccgc
ggctga
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