Paraoerskovia sediminicola: GCM125_28870
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Entry
GCM125_28870 CDS
T09128
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
psek
Paraoerskovia sediminicola
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psek03009
]
GCM125_28870
Enzymes [BR:
psek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
GCM125_28870
Ribosome biogenesis [BR:
psek03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GCM125_28870
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BDZ43588
LinkDB
All DBs
Position
3036151..3036867
Genome browser
AA seq
238 aa
AA seq
DB search
MRLQKVLAGAGMGSRRACEQLIEEGRVQVDGVTVRELGVRVDPDSVAIHVDGMRVQLDTS
LVTIALNKPRGVVSTMDDPDGRPALTQFVQNRSERLFHVGRLDADSEGLLLLTNDGELAN
RLTHPKYEVAKTYLVTVDGKVKGSLANTLLHGVEVEDGTAKVDAYKLVDTTPTQSLIEVV
IHDGRNRIVRRMFDAVGHPVDQLVRTRVGSIRLGDLPPGRTRVLGKAELGTLMADLGL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctgcagaaggtcctcgccggagccggcatggggtcgcgccgcgcctgcgagcag
ctcatcgaggagggacgcgtccaggtcgacggcgtcacggtccgcgagctcggcgtccgg
gtggacccggactcggtcgcgatccacgtcgacgggatgcgcgtccagctcgacacgtcg
ctcgtcacgatcgcgctcaacaagccgcgcggcgtcgtctcgacgatggacgacccggac
gggcgcccggccctgacgcagttcgtccagaaccggtcggaacgtctgttccacgtgggt
cgcctcgacgcggactccgagggcctgctgctcctgaccaacgacggcgagctcgcgaac
cggctcacccacccgaagtacgaggtcgccaagacctacctcgtcaccgtcgacggcaag
gtcaagggctcgctcgccaacaccctgctgcacggcgtcgaggtcgaggacggcaccgcc
aaggtcgacgcgtacaagctcgtggacaccacgccgacgcagagcctcatcgaggtcgtc
atccacgacggtcgcaaccggatcgtgcgccgcatgttcgacgccgtcgggcacccggtg
gaccagctcgtgcgcacgcgcgtcgggtcgatccgcctcggggacctgccgcccgggcgc
acgcgcgtcctcggcaaggccgagctcggcaccctcatggccgacctcgggctctga
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