Pseudodesulfovibrio cashew: GM415_15890
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Entry
GM415_15890 CDS
T06353
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel00521
Streptomycin biosynthesis
psel00523
Polyketide sugar unit biosynthesis
psel00541
O-Antigen nucleotide sugar biosynthesis
psel01100
Metabolic pathways
psel01110
Biosynthesis of secondary metabolites
psel01250
Biosynthesis of nucleotide sugars
Module
psel_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GM415_15890 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GM415_15890 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GM415_15890 (rfbC)
Enzymes [BR:
psel01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GM415_15890 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QGY41538
UniProt:
A0A6I6JKN8
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All DBs
Position
complement(3468487..3469056)
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AA seq
189 aa
AA seq
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MQVYETGFPGLLVLEPKVFQDERGFFLESYNKEAFRRLGIDCDFVQDNHAYSRDAGVLRG
FHFQTPPAAQAKLVWVTRGAVLDVVVDLRKGSPQYGRWRHVILSAANFKRMFIPKGFGHA
YVTIMPDTEFQYKVDAPYAPECEGGIAWNDPDVAMDWTPALRGREPILSEKDRRLPRLAD
FDSPFIFEE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtttacgagaccggttttcccggacttctcgttcttgaacccaaggtttttcag
gatgaacgggggttctttctggaaagctacaacaaggaggcatttcgccgcctcggcatt
gattgcgacttcgtccaggacaatcacgcctattcgcgcgacgcgggagtgttgcgcggt
tttcatttccaaactccgcccgctgcgcaggcaaagctcgtctgggtgacgcgcggcgcg
gtgctcgacgtggtcgtggacctgcgcaaggggtcgccgcagtacgggcggtggcgacac
gtgattctgtccgccgccaacttcaagcggatgttcattcccaaggggttcggccatgcc
tacgtgaccatcatgccggacaccgaatttcagtacaaggtggacgcgccttatgccccg
gaatgcgagggcggcatcgcctggaacgaccctgacgttgccatggactggacgccagcc
ctccggggtcgggaacccattctttccgaaaaggatcgccggctcccccggctggcggat
ttcgattccccctttatcttcgaggaatag
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