Pseudoalteromonas sp. NC201: PNC201_03305
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Entry
PNC201_03305 CDS
T05464
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
psen
Pseudoalteromonas sp. NC201
Pathway
psen03030
DNA replication
psen03430
Mismatch repair
psen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PNC201_03305 (holC)
03430 Mismatch repair
PNC201_03305 (holC)
03440 Homologous recombination
PNC201_03305 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psen03032
]
PNC201_03305 (holC)
03400 DNA repair and recombination proteins [BR:
psen03400
]
PNC201_03305 (holC)
Enzymes [BR:
psen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PNC201_03305 (holC)
DNA replication proteins [BR:
psen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PNC201_03305 (holC)
DNA repair and recombination proteins [BR:
psen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PNC201_03305 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
CHD1-like_C
Motif
Other DBs
NCBI-ProteinID:
AUJ68997
UniProt:
A0A2K9JU39
LinkDB
All DBs
Position
complement(764259..764705)
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AA seq
148 aa
AA seq
DB search
MTIKARFYVLKQNDEPGISVPAHFDLAAQTAASLYQAGHRIFVNVDNTDDAHLFDEHLWC
FDADRFVPHNLQGEGPKGGAPVEIGTMPPAARRPVLINLARVVPDFIRRFEQVIDFVPVE
ASAKQAARERFKQLRALGATISTEDIEK
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgactatcaaagcgcgcttttacgtgttaaaacaaaacgatgagccggggattagcgtt
ccggctcattttgatctggcagcacaaactgcggcgagcttatatcaagctggacaccgt
atctttgttaacgtcgataatactgacgacgctcatttattcgatgagcacctttggtgt
tttgacgcagacaggtttgtgccccacaacttacaaggcgaaggccccaaaggcggcgca
ccagtggaaattggcactatgcctcctgctgctcgtcgccccgtgctgattaatctggct
cgggtcgtccctgactttattcgtcgctttgaacaggtgatagactttgtgcctgttgaa
gccagcgctaagcaagccgcacgagaacgctttaagcaacttcgtgcacttggcgcaaca
atttccactgaagacattgagaaatag
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