Pseudoalteromonas piratica: OM33_12420
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Entry
OM33_12420 CDS
T03513
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pseo
Pseudoalteromonas piratica
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pseo03016
]
OM33_12420
Enzymes [BR:
pseo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OM33_12420
Transfer RNA biogenesis [BR:
pseo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OM33_12420
Prokaryotic type
OM33_12420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AIY65844
UniProt:
A0A0A7EGT9
LinkDB
All DBs
Position
1:complement(2665025..2665963)
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AA seq
312 aa
AA seq
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MGRRQKGRAIDGILLLNKPTGISSSKALQIAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFSQFLLDTDKTYVVRAKLGERTDTSDSDGEIVETKPVNITQQQLVDAVKSFEGESDQ
YPSMYSALKYEGKPLYYYARQGIEVPRKCRKINVFSLTLDEVDFDNNEIQMTAHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRSAVGHYPAEQMMSLDELQAILDDAKANDITPSEKLDP
LLLPMDTALHGMTEVLVTDGQAKAFSHGQAATMPNLPDGEFKVIRQSDKRFMGIGERNSD
GQLKSKRGLSNA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtaggcaaaaaggccgtgcaattgacggcattttactgttaaacaaaccaact
ggtatctcatcaagcaaagcactgcaaattgcgaaaggcatttactttgcgcaaaaagca
gggcataccggtgcacttgatccactggcaacgggcatgttgccaatttgttttggtgaa
gcaaccaagttttcacagtttttgttagacactgacaaaacctatgtggtgcgtgctaaa
ttaggtgaacgcacagacacgtcagattctgatggtgaaatcgttgaaactaagcctgtt
aatatcactcagcagcagttagttgatgcagtgaaatcatttgaaggcgaatcggaccaa
tacccatcgatgtactcggcgttgaaatatgaaggtaaacctttatattactacgcaaga
caaggcatcgaagtgccacgtaaatgccgtaaaatcaatgtgtttagtttaaccctagac
gaagtcgattttgacaataacgaaattcaaatgaccgctcatgtaagtaaaggtacttac
attcgcactattgttgacgatttaggtgaaaagctaggatgtggcgcacatgtgattatg
cttcatcgcagtgctgtgggtcattatcccgctgaacaaatgatgtcgcttgatgaattg
caagcgattctcgatgacgccaaagcaaatgacatcacgccaagcgaaaagcttgatccg
ttattattgccaatggataccgcattacatggtatgacagaagtattagtaaccgatggg
caagcgaaagcatttagtcatggtcaagcggcaaccatgccaaacttacctgatggtgag
tttaaagtcatccgtcaaagtgacaagcgttttatgggcattggcgaacgcaacagcgat
ggtcagttaaagtctaaacgcggattgtcaaatgcctag
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