Pseudoalteromonas piratica: OM33_16980
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Entry
OM33_16980 CDS
T03513
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pseo
Pseudoalteromonas piratica
Brite
KEGG Orthology (KO) [BR:
pseo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pseo03000
]
OM33_16980
Transcription factors [BR:
pseo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
OM33_16980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like_2
MarR_2
HTH_5
HTH_23
GerE
PBP_like
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AIY66805
UniProt:
A0A0A7EJC8
LinkDB
All DBs
Position
2:complement(494754..495686)
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AA seq
310 aa
AA seq
DB search
MASRLHAHIGTFRQLEILLAVYDGGSIKAAAESLFLTQPTVSMQLKKLSEAIGLPLYQQV
GRKLQFTDAGLATVATSRQILQQCEALDMHLSNLRGLKSGTLRISCATTAKYFIPHLLGP
FCKQYPGIDIQFTVANRQQVIERYEQGVDDFFVFSYVPEGLDLEVREFMSNDLVAIANSE
HPLTKHKKVSLKAFCQENFIIREEGSGTRYAIERFLQSKNITPNVRMTIASNEAIIHSVL
SGMGVSILSAHTLAFGDSYNVKVIDVESLPIQSKWSFCWAKSKQLSPIAKVFLDYVANEG
KDLMTKVLKL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcgactacatgcccatataggcacatttagacagcttgaaattctgttagcc
gtttacgacggaggcagtataaaagcggctgcagagtcattatttttaactcagccaaca
gtctctatgcagttgaaaaaactgagtgaagcaattggtttacccctttatcaacaggtt
ggccgaaaattacagttcactgatgcagggcttgcaactgttgcaaccagcagacaaata
ttacagcaatgcgaagcccttgatatgcatctatcaaatttacgaggcctaaaatcaggc
acgcttcgcatctcttgtgccaccactgcaaagtacttcatacctcacttattagggcca
ttttgtaaacaatatcctgggattgatattcaatttactgttgcaaatcgccaacaagtt
atcgaacgctatgagcaaggtgtagatgatttctttgtatttagttatgtgccggaaggg
ttagatcttgaagtcagagagtttatgtcaaatgacctcgtagccattgcaaattcagaa
cacccgcttacaaagcataaaaaggtttcgcttaaagcattttgtcaggaaaatttcatt
attcgcgaagaaggctctggcacacgttacgctattgagcgatttttacagtccaaaaac
attacgccgaatgtgcgtatgaccatagccagtaacgaggccattattcactcagtgtta
tccggtatgggcgtatctattctttctgctcatacgcttgcgtttggcgatagttacaat
gtaaaagtgatcgatgttgaatcattacctattcaatcaaagtggtctttttgttgggcc
aaatcaaaacaattatcccccattgccaaagtatttttagattatgtcgccaacgaaggt
aaagacttaatgacaaaagtgctcaaattgtaa
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