Pseudomonas sessilinigenes: C4K39_1208
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Entry
C4K39_1208 CDS
T07575
Name
(GenBank) tRNA pseudouridine(13) synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psep
Pseudomonas sessilinigenes
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psep03016
]
C4K39_1208
Enzymes [BR:
psep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
C4K39_1208
Transfer RNA biogenesis [BR:
psep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C4K39_1208
Prokaryotic type
C4K39_1208
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
E3_binding
Motif
Other DBs
NCBI-ProteinID:
AZC22903
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All DBs
Position
1307962..1309020
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AA seq
352 aa
AA seq
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MNELQLLGPLAYGEALGSAVLKATAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLAAAENHTLKILKAMRHRR
KLQRGAHAANGFTLRLTELKADHAAIDERLKLIAEQGIPNYFGAQRFGHEGGNLVDARDW
AAREALPEQRNVRSRLLSTARSYVFNQVLATRVADGSWRRAQVGDLLAFTDSRSFFMAGQ
PECSDPRLDILDLHPTGPLWGEGDSPAGGAIQAVEQGVADREQALCKWLIKAGMAHERRI
LRLPIGGLTWHYPVPDILQLEFVLPAGCFATALVRELVDLVPAGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaactgttgggcccactggcctatggcgaggccctgggaagcgctgtg
ctcaaggctacggccgaggatttccaggttgatgaagtcctcgatatcccacttagcggc
gatggcgagcacctgtggttgtgggtggaaaagcgcggtttgaacaccgaggaagcggca
cgccggatcgccaaggcggccggggtgccattgcgcacggtcagctatgccgggctcaag
gatcgacaggctttgacccgtcagtggttcagtgtgcaattgcccggcaaggccgatccg
gatcttgccgccgctgaaaaccacaccctgaagattctcaaggccatgcgccacaggcgc
aagctgcagcgcggagcccatgcggctaacggctttaccttgcgtctgacggagctcaag
gccgatcacgcggccatcgatgagcgcctgaaactgatcgccgagcaggggattcccaac
tacttcggtgcccagcgtttcggtcatgaaggcggtaacctggtcgatgctcgtgattgg
gcggcacgcgaggccttgccagagcaacgcaacgttcgttcgcgattgctttcgacggct
cgcagctacgtattcaatcaggtattggcaacgcgagtggccgacggtagttggcggcga
gcgcaagtgggggacttgttggcattcaccgacagccgcagctttttcatggccggacaa
cccgagtgttcggacccgcggctggatatcctcgacctgcatcccaccgggccgttgtgg
ggcgagggcgactcccctgccgggggcgcaatccaggcagtggagcaaggcgttgccgat
cgcgagcaagcgttgtgcaaatggttgataaaagctggtatggcgcacgaacgacgcatc
ctgcggctgcccattggcggtttgacgtggcattatcccgtgcctgatattctgcaactg
gaattcgtccttccggccggatgtttcgccaccgccttggtgcgcgagctcgtcgatctg
gtgccggcagggcagacggacagcccatgcgtattctga
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