Pseudomonas sessilinigenes: C4K39_2971
Help
Entry
C4K39_2971 CDS
T07575
Name
(GenBank) DinG family ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C4K39_2971
09124 Replication and repair
03420 Nucleotide excision repair
C4K39_2971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psep03021
]
C4K39_2971
03400 DNA repair and recombination proteins [BR:
psep03400
]
C4K39_2971
Enzymes [BR:
psep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
C4K39_2971
Transcription machinery [BR:
psep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
C4K39_2971
DNA repair and recombination proteins [BR:
psep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
C4K39_2971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AZC24645
LinkDB
All DBs
Position
3161539..3163800
Genome browser
AA seq
753 aa
AA seq
DB search
MSYRVAVRALCEFSAKSGDLDLRFTPSPSAQEGMLGHRTVAARRSPDYQSEVPVEGRYGE
LLVKGRADGYDPQQNLLEEIKTYRGDLARMPDNHRQLHWAQARVYAWLLCQSLQLPAIRV
SLVYFDIQSEEETAFVQEHSAEQLQAFFNQQCAIFLSWAQQELQHRALRDQGTAELRFPH
GQFRPGQRHLAESVYKAVSTGRCLLAQAPTGIGKTLGTLFPMLKAMAPQRLDKLLFLTAK
TPGRQLALEGARMLFAQQPGLPLRVLELVARDKACEYLDKACHGESCPLAKGFYQRLPAA
RQAAVQVPLLDRQALRQVALEHQVCPYYLSQEMARWSDLVVADYNYYFDSSALLFGLAQA
AQERLAVLVDEAHNLVERGRGMYSASLDQQQLAQVRKSAPQALKSSLQRLNREWNALHKE
QLVPYQVYQGIPAAWLKALGLCIAALGDYFAEHPQGVESGLQGWYFELLQFARVAELFDE
QPFIFDVSKRTLSARRSLSCLSLRNVVPAALLRPRMEAARSVVLFSATLNPRHYYQDLLG
LPEDSVWVDVESPFAATQLEVHIVKRISTRYAHRQQSLGPIVELMARQFAARPGNYLAFF
SSFDYLQQVAELLAREHPHIPLWLQARGMDEAAREDFLRKFQVEGQGIGFAVLGGAFGEG
IDLPGSRLIGAFVATLGLPQLNVLNEQMKQRMGELFGCGYDYTYLYPGLQKVVQAAGRVI
RSQADSGVLMLIDDRFNEPRVRRLLPRWWAIAP
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
ttgagctaccgcgttgcggtgcgggcgctttgcgagttcagtgccaagagcggtgatctt
gacctgcgcttcacgccatcgcccagcgcccaggagggcatgctcgggcaccgtaccgtg
gctgcccggcgcagccccgattaccaaagcgaagtgcccgtggaaggccgctatggcgag
ctgctggtcaagggccgggcagatggctacgacccgcagcagaacctgctggaggagatc
aagacctaccgcggcgacctggcgcgcatgcccgacaatcaccggcaactgcactgggcc
caggcccgggtctatgcctggttgctctgccagagcctgcaactgccggcgatccgggtg
tcgctggtgtatttcgatatccagagcgaggaggaaacggcttttgtgcaagagcacagt
gccgagcagttgcaggcgttcttcaaccagcaatgcgcaatattcctcagttgggcgcaa
caggaactgcaacatcgggcactgcgcgaccaggggaccgccgagctgcggttcccccac
gggcagtttcgccccggccagcggcacctggccgagtcggtgtacaaggcggtcagtacc
ggccgttgcctgctggcccaggctcccaccggtatcggcaagaccctgggcacgctgttt
cccatgctcaaggccatggccccgcaacggctggacaaactgttgttcctcacggccaag
accccggggcggcagttggcactggagggtgcgcgaatgctgttcgcccagcagcccgga
ttgcccttgcgagttttggagctggtggcccgggacaaggcctgtgaatacctggacaag
gcttgccatggcgaatcctgccccctggccaagggcttctaccagcgcttgcccgctgcc
cgccaggcggcggtccaggtgccgctgctcgatcgccaggccctgcgccaagtggcgctg
gagcaccaggtctgcccttactacctgagccaggagatggcgcgctggagtgacctggtg
gtggctgactacaactactactttgactccagcgccctgttgttcgggctggcccaggcc
gctcaagagcgcctggcggtactggtggacgaggcccacaacctggtagagcgaggacgc
ggcatgtacagcgccagtctcgaccagcaacaactggcccaagtgcgcaagagcgcccca
caagcgttgaagtcatccctgcaacggttgaaccgggagtggaacgcgctgcacaaggag
cagctcgtgccttaccaggtctaccaaggcatccccgctgcctggctcaaggccttggga
ttgtgcatcgccgccttgggcgactacttcgccgagcacccccagggggtggaaagtggg
ttgcagggctggtacttcgagctgttgcagttcgcccgggtggcggagttgttcgatgag
cagccattcatcttcgatgtcagcaagcgcaccttgagtgcccggcgcagcctgtcatgc
ctgagcctgcgcaatgtggtgccggccgcgctactgcgcccacggatggaggccgcccgc
agcgtggtgctgttttccgcgaccctcaatccaaggcattactaccaggacctgctgggg
ctgcccgaggatagcgtgtgggtggatgtcgagtcgccgttcgcggccacgcagttggaa
gtccatatcgtcaagcggatctccacgcgctatgcccaccgccaacagtccctggggccg
attgtcgagctgatggcccgccagttcgcggcacgtccgggaaactacctggcgttcttc
agcagcttcgattacctgcaacaggtggctgaattactggcccgggaacatccacacatt
cctttgtggctgcaggcacgaggcatggatgaagccgcccgcgaggattttctgcgcaag
ttccaggtcgagggccagggcatcggttttgcggtgctcggtggcgccttcggtgaaggc
atagacctcccgggctcgaggctcatcggtgcctttgtcgccaccctgggcctgccgcaa
ctcaatgtattgaacgaacagatgaagcagcgcatgggcgaactgttcggctgcggttat
gactacacgtacctgtaccccggcttgcagaaggtggtgcaggcggctggccgggtgatt
cgcagccaggccgatagtggggtgctgatgctcatcgacgatcgtttcaacgagcccagg
gtgcggcggttgctgccgcgctggtgggccatcgcgccatag
DBGET
integrated database retrieval system
