KEGG   Pseudomonas sp. StFLB209: PSCI_1638
Entry
PSCI_1638         CDS       T03623                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pses  Pseudomonas sp. StFLB209
Pathway
pses03030  DNA replication
pses03410  Base excision repair
pses03420  Nucleotide excision repair
pses03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pses00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PSCI_1638
   03410 Base excision repair
    PSCI_1638
   03420 Nucleotide excision repair
    PSCI_1638
   03440 Homologous recombination
    PSCI_1638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pses03032]
    PSCI_1638
   03400 DNA repair and recombination proteins [BR:pses03400]
    PSCI_1638
Enzymes [BR:pses01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PSCI_1638
DNA replication proteins [BR:pses03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PSCI_1638
DNA repair and recombination proteins [BR:pses03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PSCI_1638
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PSCI_1638
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: BAP42340
UniProt: A0A077LD51
LinkDB
Position
complement(1784246..1787020)
AA seq 924 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDELFAEYKANRPSMPDDLRVQIDLLHACVKALSYPLLCVEGVEADDVIGTLAR
SSAAAQRPVIISTGDKDMAQLVDGHVTLVNTMTGSVLDVAGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTATGLLVGIGGGLAELYANLDAVAALPIRGAKTLGAKLAEHKAM
ALLSYELATIKCDVPLDVSLDELVIGEPDHEKLIELYTELEFKSWIGEVERGARRAGQQA
AQPAVAPPPAAPAAPAAYETILEQARFDAWLEKLNSAELIAFDTETTGLDAQKAQLVGLS
FAVKAGEAAYIPLTHSYMGVPEQLDRDTVLLALKPLLEDPNKAKVGQNAKYDINILANCA
IGGDPANGITVRGVAFDTLLESYVLNSVTSHDMDSLAARHLGVQTIRFEDIAGKGKKQLT
FDQIPLEQAGPYAAEDADITLRLHQVLIEKLKAEAGLVSVLSDIEMPLVPVLAQVERNGA
RVDAALLGVQSIELGDKMAELEQQAYVLAGESFNLGSPGQLGKILYEKLELPVRGKTPTG
KPSTAVEVLEKLADEGHELPKLLQDYRTISKLKSTYTDTLPGQINPRTGRVHTSYNQAGA
ATGRFSSSEPNLQNIPVRTAEGRRIRQAFVASKGYKLLAADYSQIELRIMAHLAKDEGLL
HAFQNGLDVHRATAAEVFGVELAEVSNDQRRSAKAINFGLIYGMGAQGLARQIGVDGKQA
KAYIDRYFARYPGVRDYMERTREQAAEKGYVETLFGRRLYLPEILSSNQQQRAGAERTAI
NAPMQGTAADIIKKAMVAVSNWLDQSGLDARVILQVHDELVLEVREDLVEQIRAEIGDHM
GTAATLDVPLVVDVGVGNNWDEAH
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgagccaagcacccctcgtcctggtggacggttcgtcctatctgtaccgcgccttccac
gccctgccgccgctgacgacctccaagggtctgcccaccggtgcggtcaagggtgtgctg
aacatgctcaaaagcctgcgcaaacaataccccgatagcccgtttgccgtggttttcgac
gccaagggcggtactttccgcgatgaactgttcgccgaatacaaggccaaccggccgagc
atgcccgatgatctgagggtgcagatcgacctgttacatgcctgcgtcaaggcgttgagc
tacccgctgctgtgcgtggaaggggtcgaggccgacgacgtgatcggcacgctggcgcgc
agcagtgcggcggcgcagcggccggtgatcatctctaccggcgacaaagacatggctcaa
ttggtcgatgggcacgttacgctggtcaataccatgaccggtagcgtgctggatgtcgct
ggcgtaaaagagaaattcggcgtcggtcctgaacacatcatcgactacctggcgctgatg
ggcgacaaggtcgataacatccccggtgtcccgggggtcggcgaaaagaccgccaccggc
ctgctggtcggtatcggtggcggtctggccgagctgtacgccaacctcgatgccgtggct
gcgttgccgattcgcggcgccaagaccctgggcgccaagcttgcagagcacaaggccatg
gccttgctgtcttacgagctggcgaccatcaagtgcgatgtgccgctggacgtcagcctc
gatgagctggtcatcggtgagccggaccacgaaaagctgatcgagctgtacaccgagctg
gagttcaagagctggatcggcgaggtcgagcgcggtgcacggcgtgccggccagcaagcg
gcgcaacccgccgttgcgccgccgcccgccgctcccgccgccccggcggcctatgaaacc
attctggagcaggctcgtttcgatgcctggctggaaaagctcaacagtgccgaactgatt
gccttcgacaccgaaaccaccgggctggacgcgcagaaggcgcaactggtcggcttgtct
ttcgcggtcaaggccggtgaagcggcctatattccgctgacccactcgtatatgggcgtg
cccgagcaactggaccgcgacacggtgctgctggcgctcaagccactgctcgaagacccg
aacaaggccaaggtcgggcaaaacgccaagtacgacatcaacatcctcgccaactgcgcc
atcggcggtgacccggccaacggcattaccgtacgcggcgtggcgtttgacaccctgctt
gaatcctacgtgctcaactcggtgacctcgcatgacatggacagcctggctgcccggcac
ctgggcgtgcagaccatccgttttgaagacatcgccggcaagggcaagaagcagctgacc
tttgaccagatcccgctggaacaggccgggccttatgcggccgaggatgctgacattacc
ctgcgcctgcatcaggtgctgattgaaaagctcaaggccgaggcggggctggtcagcgtc
ctgagcgatatcgagatgccgctggtgccggtgctggcccaggtggagcgcaacggtgcg
agggttgatgcggcgctgctgggcgtccagagcatcgagttgggcgacaagatggctgag
ctggagcagcaggcgtacgtgctggccggcgagtcgttcaatctgggctcgcctggccaa
ctgggcaagatcctctacgaaaagctggaactgcccgtgcgcggcaaaaccccgaccggt
aagccatcgacggcagtcgaggtcttggagaagctggccgatgaaggtcatgaactgcca
aagctgctgcaggactaccgcacgatcagcaagctcaaaagcacctacaccgacaccttg
cctggccagatcaacccgcgtaccgggcgcgtgcacacctcctacaaccaggccggcgcc
gccaccgggcgcttctcgtccagcgagccgaacctgcagaacatcccggtgcgcaccgct
gaaggccgccgtattcgccaggcgttcgtggcctcaaagggctacaaactgctggcggcg
gactattcgcagatcgagctgcgcatcatggcccacctggccaaggatgaaggcctgctg
catgcctttcaaaatggcctggacgtgcaccgggcaaccgctgccgaggtatttggtgtc
gagctggccgaggtcagcaacgaccagcgccgcagcgccaaggcgatcaacttcggcctg
atctacggcatgggcgcccaagggctggcacgccagatcggcgtcgatggcaagcaggcc
aaggcctatatcgaccgctattttgcccgctaccccggcgtgcgtgactacatggagcgt
acccgcgagcaggccgccgagaaaggctatgtcgagaccctgttcggtcgtcgcctgtac
ctgccggaaattctttccagcaaccagcaacagcgcgctggcgccgaacgcacggccatc
aacgcgccgatgcagggcactgctgccgacatcatcaagaaagccatggtggcggtgagc
aactggctggatcaatcagggctggatgcccgggtcatcctgcaggtccacgacgaactg
gtgctcgaagtgcgtgaggatctggtcgagcagatccgcgccgagattggcgatcacatg
ggcaccgccgcaacgctggatgtgccgctggtagtggatgtcggcgtgggcaacaactgg
gacgaggcgcactga

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