Pseudomonas sp. StFLB209: PSCI_1638
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Entry
PSCI_1638 CDS
T03623
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses03030
DNA replication
pses03410
Base excision repair
pses03420
Nucleotide excision repair
pses03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSCI_1638
03410 Base excision repair
PSCI_1638
03420 Nucleotide excision repair
PSCI_1638
03440 Homologous recombination
PSCI_1638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pses03032
]
PSCI_1638
03400 DNA repair and recombination proteins [BR:
pses03400
]
PSCI_1638
Enzymes [BR:
pses01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSCI_1638
DNA replication proteins [BR:
pses03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSCI_1638
DNA repair and recombination proteins [BR:
pses03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSCI_1638
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSCI_1638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
BAP42340
UniProt:
A0A077LD51
LinkDB
All DBs
Position
complement(1784246..1787020)
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AA seq
924 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDELFAEYKANRPSMPDDLRVQIDLLHACVKALSYPLLCVEGVEADDVIGTLAR
SSAAAQRPVIISTGDKDMAQLVDGHVTLVNTMTGSVLDVAGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTATGLLVGIGGGLAELYANLDAVAALPIRGAKTLGAKLAEHKAM
ALLSYELATIKCDVPLDVSLDELVIGEPDHEKLIELYTELEFKSWIGEVERGARRAGQQA
AQPAVAPPPAAPAAPAAYETILEQARFDAWLEKLNSAELIAFDTETTGLDAQKAQLVGLS
FAVKAGEAAYIPLTHSYMGVPEQLDRDTVLLALKPLLEDPNKAKVGQNAKYDINILANCA
IGGDPANGITVRGVAFDTLLESYVLNSVTSHDMDSLAARHLGVQTIRFEDIAGKGKKQLT
FDQIPLEQAGPYAAEDADITLRLHQVLIEKLKAEAGLVSVLSDIEMPLVPVLAQVERNGA
RVDAALLGVQSIELGDKMAELEQQAYVLAGESFNLGSPGQLGKILYEKLELPVRGKTPTG
KPSTAVEVLEKLADEGHELPKLLQDYRTISKLKSTYTDTLPGQINPRTGRVHTSYNQAGA
ATGRFSSSEPNLQNIPVRTAEGRRIRQAFVASKGYKLLAADYSQIELRIMAHLAKDEGLL
HAFQNGLDVHRATAAEVFGVELAEVSNDQRRSAKAINFGLIYGMGAQGLARQIGVDGKQA
KAYIDRYFARYPGVRDYMERTREQAAEKGYVETLFGRRLYLPEILSSNQQQRAGAERTAI
NAPMQGTAADIIKKAMVAVSNWLDQSGLDARVILQVHDELVLEVREDLVEQIRAEIGDHM
GTAATLDVPLVVDVGVGNNWDEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcacccctcgtcctggtggacggttcgtcctatctgtaccgcgccttccac
gccctgccgccgctgacgacctccaagggtctgcccaccggtgcggtcaagggtgtgctg
aacatgctcaaaagcctgcgcaaacaataccccgatagcccgtttgccgtggttttcgac
gccaagggcggtactttccgcgatgaactgttcgccgaatacaaggccaaccggccgagc
atgcccgatgatctgagggtgcagatcgacctgttacatgcctgcgtcaaggcgttgagc
tacccgctgctgtgcgtggaaggggtcgaggccgacgacgtgatcggcacgctggcgcgc
agcagtgcggcggcgcagcggccggtgatcatctctaccggcgacaaagacatggctcaa
ttggtcgatgggcacgttacgctggtcaataccatgaccggtagcgtgctggatgtcgct
ggcgtaaaagagaaattcggcgtcggtcctgaacacatcatcgactacctggcgctgatg
ggcgacaaggtcgataacatccccggtgtcccgggggtcggcgaaaagaccgccaccggc
ctgctggtcggtatcggtggcggtctggccgagctgtacgccaacctcgatgccgtggct
gcgttgccgattcgcggcgccaagaccctgggcgccaagcttgcagagcacaaggccatg
gccttgctgtcttacgagctggcgaccatcaagtgcgatgtgccgctggacgtcagcctc
gatgagctggtcatcggtgagccggaccacgaaaagctgatcgagctgtacaccgagctg
gagttcaagagctggatcggcgaggtcgagcgcggtgcacggcgtgccggccagcaagcg
gcgcaacccgccgttgcgccgccgcccgccgctcccgccgccccggcggcctatgaaacc
attctggagcaggctcgtttcgatgcctggctggaaaagctcaacagtgccgaactgatt
gccttcgacaccgaaaccaccgggctggacgcgcagaaggcgcaactggtcggcttgtct
ttcgcggtcaaggccggtgaagcggcctatattccgctgacccactcgtatatgggcgtg
cccgagcaactggaccgcgacacggtgctgctggcgctcaagccactgctcgaagacccg
aacaaggccaaggtcgggcaaaacgccaagtacgacatcaacatcctcgccaactgcgcc
atcggcggtgacccggccaacggcattaccgtacgcggcgtggcgtttgacaccctgctt
gaatcctacgtgctcaactcggtgacctcgcatgacatggacagcctggctgcccggcac
ctgggcgtgcagaccatccgttttgaagacatcgccggcaagggcaagaagcagctgacc
tttgaccagatcccgctggaacaggccgggccttatgcggccgaggatgctgacattacc
ctgcgcctgcatcaggtgctgattgaaaagctcaaggccgaggcggggctggtcagcgtc
ctgagcgatatcgagatgccgctggtgccggtgctggcccaggtggagcgcaacggtgcg
agggttgatgcggcgctgctgggcgtccagagcatcgagttgggcgacaagatggctgag
ctggagcagcaggcgtacgtgctggccggcgagtcgttcaatctgggctcgcctggccaa
ctgggcaagatcctctacgaaaagctggaactgcccgtgcgcggcaaaaccccgaccggt
aagccatcgacggcagtcgaggtcttggagaagctggccgatgaaggtcatgaactgcca
aagctgctgcaggactaccgcacgatcagcaagctcaaaagcacctacaccgacaccttg
cctggccagatcaacccgcgtaccgggcgcgtgcacacctcctacaaccaggccggcgcc
gccaccgggcgcttctcgtccagcgagccgaacctgcagaacatcccggtgcgcaccgct
gaaggccgccgtattcgccaggcgttcgtggcctcaaagggctacaaactgctggcggcg
gactattcgcagatcgagctgcgcatcatggcccacctggccaaggatgaaggcctgctg
catgcctttcaaaatggcctggacgtgcaccgggcaaccgctgccgaggtatttggtgtc
gagctggccgaggtcagcaacgaccagcgccgcagcgccaaggcgatcaacttcggcctg
atctacggcatgggcgcccaagggctggcacgccagatcggcgtcgatggcaagcaggcc
aaggcctatatcgaccgctattttgcccgctaccccggcgtgcgtgactacatggagcgt
acccgcgagcaggccgccgagaaaggctatgtcgagaccctgttcggtcgtcgcctgtac
ctgccggaaattctttccagcaaccagcaacagcgcgctggcgccgaacgcacggccatc
aacgcgccgatgcagggcactgctgccgacatcatcaagaaagccatggtggcggtgagc
aactggctggatcaatcagggctggatgcccgggtcatcctgcaggtccacgacgaactg
gtgctcgaagtgcgtgaggatctggtcgagcagatccgcgccgagattggcgatcacatg
ggcaccgccgcaacgctggatgtgccgctggtagtggatgtcggcgtgggcaacaactgg
gacgaggcgcactga
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