Pseudomonas sp. StFLB209: PSCI_3758
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Entry
PSCI_3758 CDS
T03623
Name
(GenBank) KU domain-containing protein
KO
K10979
DNA end-binding protein Ku
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PSCI_3758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pses03400
]
PSCI_3758
DNA repair and recombination proteins [BR:
pses03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PSCI_3758
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Tom5
Motif
Other DBs
NCBI-ProteinID:
BAP44460
UniProt:
A0A077LIJ9
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All DBs
Position
4210228..4211127
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AA seq
299 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATSSEGVDFDWLDKRSMDPVGYKRVNKVTGKEVSAEN
IVKGVEYQKDRYVVLSEEEIRAAHPEATQTIDIFGFVDSQQIPLQHIDTPYYLAPVQRGE
KVYALLRETLHTSNKVALANVVLHTREHLAALMPLASALVLVLLRWPEQVRDMDETLQLS
EAVTDVKLSKGERDMAKKLVKDMSVDWRPEDYRDTFQDKIMALVKTKAKRGKLEAVGGQS
PDPERKQADVIDLTELLRQSLAGQSSPRKTKASARTSAKPAAKSGEAKPASPGKRRRAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcaagggcaatctggaagggcgcgatcagcttcggtctggtgcatatcccggtggca
ctggtgtcagccaccagcagcgagggcgtggatttcgactggctcgacaagcgcagcatg
gacccggtgggctacaaacgggtcaacaaggtgaccggtaaagaggtcagcgcagaaaac
attgtcaagggcgtggagtatcagaaagaccgctacgtggtgctcagcgaggaggaaatt
cgcgccgcccatcccgaggcgacccagaccatcgacatctttggctttgtcgacagccag
cagattcccttgcagcacattgatacgccttattacctggcgccggtgcaacgtggtgaa
aaggtctacgccttgctgcgtgagaccctgcataccagcaacaaggtggccttggccaat
gtggtgctgcacacccgcgagcatttggcggcattgatgccgttggcttcggcgctggtg
ctggtattgctgcgttggccggagcaggtgcgtgatatggatgagacgctgcaactgagc
gaggcggtgacggacgtcaaactgagtaaaggcgagcgggatatggcgaaaaagctggtc
aaggacatgagtgtcgactggcggcccgaggactaccgcgacacttttcaggacaagatc
atggcgttggtcaagaccaaggccaagcgcggcaaattggaagccgtgggtgggcaaagc
ccggatcctgagcgcaaacaggcggacgtgattgacctcaccgagttgctgcgccagagc
ttggccggccagagcagcccgcgcaagaccaaggcgtcagccaggacttcggccaagcct
gccgccaagtccggtgaggccaaaccggcaagccctggcaaacgccgccgcgccgggtag
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