Pseudomonas sp. StFLB209: PSCI_4646
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Entry
PSCI_4646 CDS
T03623
Name
(GenBank) sigma24-like DNA-directed RNA polymerase
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSCI_4646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pses03021
]
PSCI_4646
Transcription machinery [BR:
pses03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSCI_4646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_24
MarR_2
HTH_23
HTH_Tnp_4
Rv2175c_wHTH
HTH_AsnC-type
HTH_10
Motif
Other DBs
NCBI-ProteinID:
BAP45348
UniProt:
A0A077LQU1
LinkDB
All DBs
Position
5207183..5207713
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AA seq
176 aa
AA seq
DB search
MPPSRSDAAQLNVRNRVLHQLFGDHHSWLLGRLRARLGCPAEAADMASETFVQVVAAPCP
LTIREPRALLTTIAKRLVFASWRRRDLERAYLESLAQQPEVYAPSAEEQAQALQALVALD
RLLEGLSPIGRSAFLYSQLDNLTYAEIGQRLGISAPRVHQYVAKALALCYLALEPA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgccaccatccaggtctgacgccgcgcaattgaacgtccgcaatcgtgtcctgcatcag
ttgttcggcgatcaccacagctggctgctcggccgcctgcgcgcacgcctgggctgcccg
gcagaagccgcagacatggcttcggaaaccttcgttcaggtggtcgctgcgccttgcccg
ctgacaattcgtgagccgcgtgcgctgctgaccaccatcgccaagcgtctggtgtttgcc
agttggcgacgccgtgatctggaacgcgcttatctggaaagtctggcgcagcaacccgaa
gtttacgccccgtcggccgaagaacaggcccaggcactgcaagccttggtggcgctggat
cggctgctcgaaggcctgtcaccgattggccgcagcgcctttctgtacagccagctggac
aacctgacctacgccgaaatcggccagcgcctgggtatttctgcgccacgggttcatcag
tacgtggccaaggcgctggcgctttgttatctggcgctggagccggcatga
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