Pseudomonas sp. TCU-HL1: THL1_2884
Help
Entry
THL1_2884 CDS
T05373
Name
(GenBank) LysR family transcriptional regulator
KO
K02623
LysR family transcriptional regulator, pca operon transcriptional activator
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pset03000
]
THL1_2884
Transcription factors [BR:
pset03000
]
Prokaryotic type
Helix-turn-helix
LysR family
THL1_2884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AOE85432
UniProt:
A0A1B3E7B1
LinkDB
All DBs
Position
3114356..3115345
Genome browser
AA seq
329 aa
AA seq
DB search
MADWPVLALAFAGQPTQDLPLNIDTRIKFRHLLCFLEVARQGSLARAADQMAVSQPAISK
TLKELEEILDASLFDRSKSGASLTEAGLAFMRYAGPCVQALRDGVNSLREGEYAAGTVRL
GVLSTVEGLLVPEVVRRLHQSHPSLVISVLTGPGAYLLSQLRVGELDLVVGRMTDNPEIH
GLTFEHLYSESMTLVVRAGHPLLEEGADRRSLDGFPLVLPLAGTTIRKHADGFFVQSGIS
PPRQRLETLSLALSRRYVLNGDAVWIAPLDAVRLDLASGELEELDLGFKEPGGSVGICSN
ASLPLSLAAHWAVETLREAALDYREGRLT
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggctgattggcccgtccttgcgctagccttcgcaggccagccgacacaggacctgccg
ttgaacatcgatacccgcatcaaattccgccacctgctgtgctttctcgaagtcgcgcgc
cagggcagcctggcccgtgcggcggaccagatggccgtcagccagccggccatctccaag
accctcaaggaactggaagagattctcgacgccagcctgttcgatcgcagcaagagcggc
gccagcctgaccgaggcggggctggccttcatgcgctatgcgggcccttgcgtccaggcc
ctgcgcgacggcgtcaacagcttgcgcgagggcgagtacgccgccggcacggtgcgcctc
ggggtgctttccacagtggaaggcctgctggttcccgaagtggttcgccgcctgcaccag
agccatccttcgctggttatcagcgtgctcactgggccgggtgcctacctgctgtcacag
ctccgggtgggcgaactcgacctggtggtcgggcgcatgaccgataacccggaaatccac
ggcctgaccttcgaacacctgtacagcgaatccatgaccctggtggtccgcgccggtcac
ccgctgctggaggagggggccgatcgccgctccctggatgggttccctctggtgctgccg
cttgctggtaccaccattcgcaagcacgccgacggctttttcgtgcagagcggcatcagc
ccgccgcgccagcgcctggaaaccctgtccctggccctgagccggcgctatgtgctgaac
ggcgatgcggtgtggatcgctccgctggatgccgtgcgcctggatctggccagcggcgaa
ctggaggagctggacctgggcttcaaggaacccggtggctcggtggggatctgcagcaat
gcctccttaccgctttcgctggcggcacactgggcagtggagaccctgcgggaggcggcg
ctggactatcgcgaggggcgcctgacataa
DBGET
integrated database retrieval system
