KEGG   Paracoccus seriniphilus: JHW44_00325
Entry
JHW44_00325       CDS       T08801                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
psew  Paracoccus seriniphilus
Brite
KEGG Orthology (KO) [BR:psew00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psew03009]
    JHW44_00325
   03016 Transfer RNA biogenesis [BR:psew03016]
    JHW44_00325
Enzymes [BR:psew01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     JHW44_00325
    5.4.99.29  23S rRNA pseudouridine746 synthase
     JHW44_00325
Ribosome biogenesis [BR:psew03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    JHW44_00325
Transfer RNA biogenesis [BR:psew03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    JHW44_00325
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: WCR13972
LinkDB
Position
complement(66762..67409)
AA seq 215 aa
MSFVYAPPMDAPEIIHADHEILVVNKPSGLLSVPGRGPEKADCMIERLRGAFPTVLLVHR
LDLDTSGVMVFGLTPHAQRNLSRQFEERRTKKVYIARLDGRLEPKTGRVDLPLIVDWPNR
PRQKVDHETGKPAQTDWRVMKSSDTETRVRLFPLTGRSHQLRVHMLSTGHVILGDPLYAS
GAAADHPRLMLHAESLRLKHPDSGMQMTFRAPVPF
NT seq 648 nt   +upstreamnt  +downstreamnt
atgagctttgtctacgctccgcccatggatgcgcccgagatcatccatgccgatcacgaa
attcttgtcgtgaacaagccctcggggctgttgtcggtgccagggcgcggccctgaaaag
gccgattgcatgatcgagcgtttgcgcggcgcgttcccgaccgtgctgctggttcaccgg
ctggatctggatacctctggggtgatggttttcgggctgacaccccatgcgcagcgcaat
ctgtcccggcaattcgaagagcggcgcacgaaaaaggtctatatcgcccggcttgacggg
cggctggagcccaagaccgggcgcgtggatctgccgctgatcgtcgactggcccaatcgc
ccgcgtcagaaggtcgatcacgagacaggcaagcccgcccagaccgattggcgcgtcatg
aagtccagcgataccgaaacacgggtgcggctgttccccctgaccggacgcagccatcag
ctgcgggtgcatatgctcagcaccggtcacgtcattctgggcgacccgctctatgcctcg
ggggcggcggcggatcacccgcgcctgatgctgcatgccgagagcttgcgcctgaaacat
cccgacagcgggatgcagatgaccttcagggcgcccgtgcccttctag

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