Paracoccus seriniphilus: JHW44_00325
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Entry
JHW44_00325 CDS
T08801
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
psew
Paracoccus seriniphilus
Brite
KEGG Orthology (KO) [BR:
psew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psew03009
]
JHW44_00325
03016 Transfer RNA biogenesis [BR:
psew03016
]
JHW44_00325
Enzymes [BR:
psew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
JHW44_00325
5.4.99.29 23S rRNA pseudouridine746 synthase
JHW44_00325
Ribosome biogenesis [BR:
psew03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JHW44_00325
Transfer RNA biogenesis [BR:
psew03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
JHW44_00325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WCR13972
LinkDB
All DBs
Position
complement(66762..67409)
Genome browser
AA seq
215 aa
AA seq
DB search
MSFVYAPPMDAPEIIHADHEILVVNKPSGLLSVPGRGPEKADCMIERLRGAFPTVLLVHR
LDLDTSGVMVFGLTPHAQRNLSRQFEERRTKKVYIARLDGRLEPKTGRVDLPLIVDWPNR
PRQKVDHETGKPAQTDWRVMKSSDTETRVRLFPLTGRSHQLRVHMLSTGHVILGDPLYAS
GAAADHPRLMLHAESLRLKHPDSGMQMTFRAPVPF
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgtctacgctccgcccatggatgcgcccgagatcatccatgccgatcacgaa
attcttgtcgtgaacaagccctcggggctgttgtcggtgccagggcgcggccctgaaaag
gccgattgcatgatcgagcgtttgcgcggcgcgttcccgaccgtgctgctggttcaccgg
ctggatctggatacctctggggtgatggttttcgggctgacaccccatgcgcagcgcaat
ctgtcccggcaattcgaagagcggcgcacgaaaaaggtctatatcgcccggcttgacggg
cggctggagcccaagaccgggcgcgtggatctgccgctgatcgtcgactggcccaatcgc
ccgcgtcagaaggtcgatcacgagacaggcaagcccgcccagaccgattggcgcgtcatg
aagtccagcgataccgaaacacgggtgcggctgttccccctgaccggacgcagccatcag
ctgcgggtgcatatgctcagcaccggtcacgtcattctgggcgacccgctctatgcctcg
ggggcggcggcggatcacccgcgcctgatgctgcatgccgagagcttgcgcctgaaacat
cccgacagcgggatgcagatgaccttcagggcgcccgtgcccttctag
DBGET
integrated database retrieval system