Polypterus senegalus (gray bichir): 120516791
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Entry
120516791 CDS
T08668
Symbol
sox6
Name
(RefSeq) transcription factor SOX-6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120516791 (sox6)
Transcription factors [BR:
psex03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120516791 (sox6)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GvpL_GvpF
Motif
Other DBs
NCBI-GeneID:
120516791
NCBI-ProteinID:
XP_039594668
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Position
1:333612532..333758983
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AA seq
573 aa
AA seq
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MITQLISLREQLLAAHDEQKKLAASQIEKQRQQMELARQQQEQIARQQQQLLQQQHKINL
LQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTM
AAAAASGLSPLQLQQLYTAQLASMQVSPSAKMPSLPQPPNPAAPNSPTGLKSEKRGASPV
TQVKDEATQPLNLSARPKTAEPVKSPTSPTPSFFPISKSSPVNLPAKSGIPSPVGTGLGR
GSLDILSSLNSTALFGDQDAVMKAIQEARKMREQIQREQMQHHQQVVEGKLASLAPMGFN
NCRSDKDRVQFENLGNPLAGKLGEDGKLGPRVIDLTRPEDLDGGASTTEARVYRESRGRN
SNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMSNQEKQPYYEEQA
RLSKIHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFTVGQQPQIPI
STAAGVVYPGAITMATTTPSPQMTSDCSSTSASPEPAIPVIQSTYSMKVEGGGLVGNETV
NGEDEMDMYEDYEDDPKSDYSSDNETHEAVSAN
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgatcacccagctcatcagcttacgagaacagctcctggccgctcacgacgagcagaag
aagctggcagcctcacaaatcgagaagcagcggcagcaaatggagctcgcccgacagcag
caggagcagatcgcccgacagcagcagcagctcttacagcagcagcacaagatcaacctt
ctgcagcagcaaattcagcaggtccagggtcacatgcctcccctcatgatcccgattttc
ccacacgaccagcggactttggcagcggcggcggcggcccagcagggattcctctttccc
ccaggaatcacgtacaagccaggtgataactaccccgtgcagttcattccatcgacaatg
gcagctgccgccgcgtctggactcagccctctacagctccagcaactctacacagcccag
ctggccagcatgcaggtgtctcccagtgccaagatgccttctttaccccagcctcctaat
cctgctgccccaaattcgcctactggcctgaagagcgagaagcgtggcgccagccccgtc
actcaagtcaaggacgaggccacgcagcccctcaacttgtcggcacgacccaagaccgcc
gagccagtcaagtcgcccacctcccccacgccgagcttcttccccatcagtaaaagcagc
ccagttaacctgccagccaagagtggcatccccagccccgtgggcaccggtttgggaaga
ggatctctggacatcttgtccagtctcaactcaacggccctcttcggggatcaggacgcg
gtgatgaaagccatccaggaggctcgcaaaatgagggagcagatccagcgggagcagatg
cagcatcaccagcaggtagtggagggcaagctggcgtctctcgctcccatggggtttaac
aactgcaggagtgacaaggacagggtgcagtttgaaaacctcggcaatcccttagcaggc
aagctgggagaggacggcaagctgggtcctcgagtcattgacctgaccagaccagaagac
cttgatggaggcgccagcacgactgaggcaagagtgtacagggagtcgagaggacgaaac
agcaacgagccccacatcaagcggccaatgaacgccttcatggtctgggccaaagacgag
cgccggaaaattctgcaggccttcccggacatgcacaactccaatatcagcaaaatcctg
gggtctcgctggaaagcaatgtccaaccaggagaagcagccttactatgaggagcaggcc
cggctcagcaagatccacttagagaaatacccgaattacaagtacaagccgcggcccaag
cgcacctgcatcatcgacggcaagaaactgcgcatcggcgagtacaagcagatgatgcga
tcccgacggcaggagatgcggcagttcttcactgtggggcagcagccgcagattccaatc
agcacagcagccggagtggtgtatcccggggcaatcaccatggcgaccaccacaccctcc
ccccagatgacgtcggactgctcgagcacctcggcgagccctgagcctgccattcccgtc
atccagagcacttacagcatgaaggtggaaggcggtggcctggtgggcaacgagacggtg
aacggcgaggacgagatggatatgtacgaggattacgaggacgaccccaagtcggactat
agcagtgacaatgaaacccatgaggccgtcagtgccaactga
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