Polypterus senegalus (gray bichir): 120518018
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Entry
120518018 CDS
T08668
Name
(RefSeq) thyroid hormone receptor alpha
KO
K05547
thyroid hormone receptor alpha
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120518018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120518018
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
psex03310
]
120518018
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120518018
Nuclear receptors [BR:
psex03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
120518018
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120518018
NCBI-ProteinID:
XP_039596502
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Position
17:complement(17998023..18086834)
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AA seq
409 aa
AA seq
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MEHMPREQEANLSEGEEKRWLDGPKRKRKNSQCSVKSMSGYIPSYLEKDEPCVVCGDKAT
GYHYRCITCEGCKGFFRRTIQKSLHPSYTCKYDGCCIIDKITRNQCQLCRFKKCISVGMA
MDLVLDDSKRVAKRRLIEENREKRKREEMFRTLQNRPEPTALEWDLIRMVTEAHRHTNAQ
GSHWKQKRKFLPDDIGQSPVTPSSDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSE
LPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGVVSDAIFD
LGKSLAQFNLDDTEVALLQAVLLMSSDRSGLSCMDKIEKCQETFLLAFEHYINYRKHNIP
HFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaacacatgcccagagagcaggaagctaacctgtctgagggggaagaaaaacggtgg
cttgacggtccaaaacgtaaacgaaaaaacagccaatgttcggtgaagagtatgtctggg
tatatccccagctatctggagaaggacgagccatgtgtagtgtgtggggacaaagctaca
ggataccattatcgctgcatcacctgcgaaggctgcaagggatttttccggcgcacgatt
cagaagagcctgcacccttcctacacatgcaagtatgatggctgctgcatcattgacaag
atcacacgcaaccaatgccagctgtgccgcttcaagaagtgcatttcagttggcatggca
atggacttggtcctagatgactcaaagcgtgtggctaaaagacgtctaattgaggagaac
agggagaaacggaagagggaggaaatgttcaggaccttgcagaatcgtcctgagccaact
gccctggagtgggaccttatccgtatggtaactgaagcccatcgccacaccaatgcgcaa
ggctcacactggaagcagaagcgcaagttcctgccagatgacattggccagtctcctgta
actccatcatctgatggggataaggtggatctggaagccttcagtgaattcaccaagata
attacgccagccatcacgcgagtcgtggactttgccaaaaaattgcccatgttctctgaa
ctgccttgtgaagaccagatcatcctcctcaaaggctgttgcatggaaataatgtcactg
cgagcagctgttcgttacgatcctgagagtgagacactaactctcagtggtgaaatggca
gtgaaacgggagcagctgaaaaatgggggtttgggtgtagtctcggatgccattttcgac
ctcggcaagagccttgctcagttcaatttggatgacaccgaagtggccctgctgcaggct
gtgctgctaatgagttcagaccgctctggcctctcctgcatggataagattgagaaatgc
caggagacctttctgctggcttttgaacactacatcaactaccgcaagcacaacattccc
cacttctggcccaaactgcttatgaaggtgactgacctgcgcatgattggtgcctgccat
gcaagccgcttcctccacatgaaggtggagtgccccacagaactatttcccccgctgttc
ttagaagtttttgaggaccaggaggtatga
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