Polypterus senegalus (gray bichir): 120521000
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Entry
120521000 CDS
T08668
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120521000
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120521000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
Prok-RING_4
U-box
zf-RING_5
Taxilin
zf-RING_11
CDT1_C
zf-Nse
Exonuc_VII_L
LMBR1
Alb1
Motif
Other DBs
NCBI-GeneID:
120521000
NCBI-ProteinID:
XP_039598858
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MAEAQLCGLQDEFTCSVCLDTLTDPVTIPCGHNFCLKCITNYWDHSQECSCPQCRENFTT
RPALRKNNLLNEVIKKLKKTTLSPPTPQNYASPGDVECDFCTGKKFRAVKSCLTCMASYC
QTHLQPHYEVAAWKGHKLVDPDRNLKEKLCQKHQKSLEIFCKTDDSCICMMCVVTGHNGH
KMVELETEREEKQKQLGVTLSDIKRGLEEREKTLKETRRAMDEMKMSVVKEVEENEKSFT
ALIRCIEEAHRKLTERIREQEKREMEKAEGVVKQLENKIKELKRRESELKELSETKDHLH
FLQTFSSCCVLPADGDSLSFTVTADFSSEDMRKELSGLTKSLEKISQWVIMTRTPS
NT seq
1069 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcccagctatgtggattacaggacgagttcacctgctcggtatgtctggac
accctgactgaccccgtcaccatcccctgtggacataatttctgtctgaagtgcatcaca
aactactgggatcacagccaagagtgcagctgtcctcaatgcagagaaaacttcaccacg
aggcctgctctacgaaaaaataatctgctgaatgaagtcatcaagaaattaaagaagacg
acactcagtcctcctactcctcagaattatgccagccctggagacgtggagtgtgatttc
tgtactggtaagaagttcagagcggtgaagtcctgtctaacctgcatggcctcctactgt
cagactcacctgcagcctcactatgaagtagcggcctggaagggacacaagctggttgat
cctgatagaaatctgaaggagaaactctgtcagaaacatcagaaaagtctggagatattc
tgtaaaactgatgattcctgtatctgcatgatgtgtgtggtgactggacataatgggcat
aaaatggtcgagctggagacggaaagagaagaaaagcagaaacagctgggggtgacactg
agtgacatcaaaaggggacttgaggagagagagaagacactgaaggagacgaggagggcg
atggacgagatgaagatgtctgtggtaaaagaggtggaagaaaatgagaagagcttcact
gctctaatacgttgcattgaggaagcccacaggaaactgactgagaggatcagagaacaa
gaaaagagagaaatggaaaaggctgaaggagtcgtgaagcaactggagaacaagattaaa
gagctgaagaggagagaatctgagctgaaggagctttcagagaccaaggaccatctacac
ttcctgcagactttctcctcttgctgtgtccttcctgctgatggagactcgctgagcttc
actgtcaccgctgatttctcatctgaggacatgagaaaggagctgtcaggtctgacaaag
agtctggagaagatcagccagtgggtcatcatgacaaggactccatcag
DBGET
integrated database retrieval system
