Polypterus senegalus (gray bichir): 120521493
Help
Entry
120521493 CDS
T08668
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120521493
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120521493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
YkyA
zf-RING_6
FUT8_N_cat
Y1_Tnp
Fmp27_WPPW
U-box
Tex_N
DUF885
V_ATPase_I
4HB_MCP_1
LXG
DUF4407
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
120521493
NCBI-ProteinID:
XP_039599007
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MAAANKSSVSADPFSCPVCLEVLKEPVTLVCGHSYCMDCINDYWDKSDKEGAYSCPQCRR
TFKEKPELNRSTVLTELIEKLKEVTDDGANSESYAGPDDVPCDVCTERKLRAVKSCLTCM
ASYCETHLQAHRRSEVLKRHKLEDPNGNLEEKLCTKHQEVLKIFCRTDDTCVCLLCAVTE
HKSHDTVTPEEARAERQSQVEERKEEMKKKIEEKEKKLEEVKEAIEKIQSSAKREVEELE
ETFKTLLKTIDHVRSEVTEVIKGHERREVTKAEVHMEQLEEDIKELKKRNAELAELSHTD
DHIHFLKALPSICFLLGDEETGDISVNGELLPETLKMSLSDLKENLQEINGWEFLKTSEP
GPDVPGHILQNLQTRNGLLKYSCPLTLDPNTAHRNLHLSEENKKVTSEEEEASYPDHPDR
FDTWLHVLCKEALSGTRCYWELEWSGKGAEIGVTYKGIGRKGEGDESSLGHNDKSWILVC
TDSSYAAWHNNEKIEISAPCSHRVGVFLDYSAGSLSFYSISDTITLLQRFNTSFTEPLYP
GFGFVWDSSVTICSL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagctaataaatcttcagtgtccgccgatccgttctcctgcccggtgtgtctg
gaggtcctgaaggagccggtcactcttgtatgcggacacagctactgtatggactgcatt
aatgactactgggacaagtcggataaggagggggcctacagctgtcctcagtgcagacgg
acatttaaagagaagccggagctgaacagaagcaccgtattaacagaactgatcgagaaa
ctgaaggaggtgacagatgatggagctaattctgagagttatgctggacctgacgacgtg
ccctgtgatgtttgtacggaaagaaaactgagggccgtaaagagctgcctgacctgcatg
gcctcctactgtgagactcacctgcaggctcaccggcggtccgaagttctgaaaagacac
aagctggaggatccaaatggaaatctggaagagaaactctgtacaaaacaccaagaagtt
ctgaaaattttttgtaggacggatgatacctgcgtctgcttactgtgcgcagtgactgaa
cataagagtcatgacacggtgacacctgaagaagcgagagctgagagacagagtcaggtg
gaagagagaaaggaagaaatgaaaaagaaaattgaggagaaagagaaaaaactggaggag
gtaaaggaggccatagaaaagattcagagctcagcaaagagagaagtggaagaactcgag
gagaccttcaagactttacttaagacaatagaccatgtaagatcagaggttactgaagtc
attaaaggtcatgaaaggagggaggtaacaaaggctgaagtgcacatggagcagctggag
gaggacatcaaggagttgaagaagagaaacgctgagctggctgagctttcacatacagat
gaccacatccacttcctaaaggcacttccttctatctgtttcctgcttggagatgaagaa
acaggagacattagtgttaatggagagttacttcctgagactctgaagatgagtctgtct
gatctgaaggagaatctgcaggagatcaatggctgggagtttttgaagaccagtgagcct
gggcctgatgttccaggacacatcctgcaaaatttgcagaccagaaatggacttttaaaa
tactcctgtccactcaccttggaccccaacacagcacacagaaatctccatctgtcagag
gaaaacaagaaggtgacgagtgaggaggaagaggcctcataccctgatcatcctgacaga
tttgacacttggctccacgttctgtgtaaagaggctctgagtgggactcgctgttactgg
gagctcgagtggagtggaaaaggagctgagattggagtgacgtacaaaggaattggaagg
aaaggagagggagatgagagttctcttggacacaatgacaagtcctggattttggtctgc
actgattccagttacgctgcatggcacaataacgagaagattgaaatcagtgccccctgt
agccacagagtaggtgtgtttttggactattctgctggctctctgtcattttatagcatc
tcagacaccataaccctcctgcagaggttcaacacctcctttactgagccactctatcct
gggtttgggtttgtctgggactccagtgtgactatctgctctctctga
DBGET
integrated database retrieval system
