Polypterus senegalus (gray bichir): 120528376
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Entry
120528376 CDS
T08668
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120528376
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120528376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
eIF3_subunit
Alb1
Sec5
DUF5446
HAUS6_N
IFT46_B_C
DUF3987
Mt_ATP-synt_D
Motif
Other DBs
NCBI-GeneID:
120528376
NCBI-ProteinID:
XP_039608465
LinkDB
All DBs
Position
4:244790403..244800695
Genome browser
AA seq
327 aa
AA seq
DB search
MREHEKSFTDLIHCIEEAHKKLKERIREQEKREMEKAEGVMEQLEKEIEELKRREAELKE
LSETEDHLHYLQTFSPLCDLPADGDSLGFTVTAEFSSEDLLKELSGLKKSLEKISQQDIL
TRTPPVREAPIFTLQSPQPQSREEFLQYFCPLTLDINTAHRNLYLSEGNKKVTYEGTNAK
YPDHPDRFDYWCQVLCREALTGTRCYWEVEGSGRIMKIGVAYKGLRRKGGDDECRLGYND
KSWSLQRSVFQCSVRHNNQWTLISAPYCPRVGVYLDWPAGSLSFYSVSHTMTLLHRFNTS
FTEPLFPGFSVGLHSTVTISHLTPCDH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagggaacacgagaagagcttcactgatctgattcactgcattgaggaagcccacaag
aaattgaaagagaggatcagagaacaagaaaagagagaaatggagaaggctgaaggagtc
atggagcaactggagaaggagattgaggagctgaagaggagagaagctgagctgaaggaa
ctttcagagaccgaggatcatctccactacctacagactttctcacctctctgtgacctt
cctgctgatggagactcgctcggctttactgtcacggctgagttttcttctgaggacctg
ctaaaggagctgtcaggtcttaaaaagagtctggagaagatcagccagcaggacatcctg
acaaggactccaccagttcgtgaagctccaatcttcaccctacagtctcctcaacctcag
agcagagaggagtttttacaatacttctgtcccctcacactggacatcaacacggcacac
agaaacctctatctgtctgaagggaacaagaaggtgacatatgaggggacaaatgccaaa
tatcctgatcaccctgacagatttgactactggtgccaagttctgtgcagagaggctctg
actgggactcgctgttactgggaggtggagggcagtggacgcatcatgaagattggagtc
gcatataaaggactgagaaggaaaggaggagacgatgagtgccgtcttggatacaacgac
aagtcctggagtttgcagaggtctgttttccagtgctctgtgcgtcacaataaccagtgg
actctaatcagtgccccctactgccccagagtaggtgtgtatctggactggcctgctggc
tctctgtcattttatagcgtctcacacacaatgaccctcctgcacaggttcaacacctcc
ttcactgagcccctctttccagggtttagtgttggtcttcactccactgtaacaatcagc
catctgacaccatgtgaccactga
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