Polypterus senegalus (gray bichir): 120528438
Help
Entry
120528438 CDS
T08668
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120528438
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120528438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-RING_6
zf-RING_5
Prok-RING_4
U-box
zf-RING_11
PRP9_N
ATP-synt_E
zf-RING_4
bZIP_Maf
Y1_Tnp
Motif
Other DBs
NCBI-GeneID:
120528438
NCBI-ProteinID:
XP_039608526
LinkDB
All DBs
Position
4:249275358..249303206
Genome browser
AA seq
558 aa
AA seq
DB search
MAEAHLGRLKDEFICTICLDSLSDPVTIPCGHNFCLKCISDCWDQSQEFFCPQCREKFST
RPALRRKNLLNEVIKKLKKTALSSPPSKNYASRGDVECDACTGKKFRAVKSCLTCLASFC
QTHLQPHNEVVAWKGHKLVDPDRKLKEKLCVKHQKSLEMFCRTDEICICMMCGMTEHTSH
EKVELKTEREEKQKQLGATQSEIRKRLEDKEKKLKETRRTAEEMKLSVERVMGEHEKSFT
DLIHCIEEAHGKLTKKIKEQEKREMEKAEGVMEQLKKEIEELKRREAELKELSKTKDHIH
FLQTFSSRCVLPAHGDSLNFTVTADFSSEDLLKELSGLKKRMEKISKWDIMTRTPPGREA
PIFTLQPLEPQSREDFLQYFCPLTLDINTAHRDLCLSEGNKKVTREGTKDKYPDHPDRFD
CWEQVLCREALTGTRCYWEVECSGDFMVFGVAYKGLSRKGLGVECGLGYNDRSWSLLQYP
SQYFVYHNNKETEIIAPYSPRIGVYLDWPAGSLSFYSVSHTMTLLHTFYSSFTEPLYPGF
YLGNNSSATISHLTPGDR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcccacctcggtagattaaaggatgagttcatctgcacaatttgtctggac
tccttgagtgaccctgtcactatcccctgtggtcacaatttctgtctgaagtgcatcagc
gactgttgggatcagagtcaagagttcttctgtccacagtgtagagagaagttcagcaca
aggcctgctctgcgaagaaagaatctgctgaatgaagtcatcaaaaaattaaagaagacg
gcactcagttctcctccatctaagaattatgccagccgtggagatgtggagtgtgatgcc
tgtactgggaagaagttcagagcagtgaagtcctgtctaacctgcttggcctctttctgt
cagactcacctgcagcctcacaatgaagtagtggcctggaagggacacaagctggttgat
cctgatagaaagctgaaggaaaagctctgtgtgaaacatcagaagagtctggagatgttt
tgcagaaccgatgagatatgcatctgcatgatgtgtggaatgactgaacacactagtcat
gaaaaggtggagctgaagacggaaagagaagaaaaacagaaacagctgggggcgacacag
agtgaaattaggaaaagacttgaagacaaagagaagaaactgaaggagacgaggaggaca
gcggaggagatgaagctttctgtggaaagagtgatgggagaacatgagaagagcttcact
gatctgattcactgcattgaagaagcccacggaaaattgaccaagaagatcaaagaacaa
gaaaagagagaaatggagaaggcggaaggagtcatggagcaactgaagaaggagattgag
gagctgaagaggagagaagctgagctgaaggagctttcaaagaccaaggaccacatccac
tttctgcagactttctcatctcgctgtgtccttcctgctcatggagactcgctcaacttc
actgtcactgctgacttttcttctgaggacctgctaaaggagctgtcaggtctgaaaaag
agaatggaaaagatcagcaagtgggacatcatgacaaggactccaccaggtcgtgaagct
ccaatcttcaccctacagcctcttgaacctcaaagcagagaggactttttacagtacttc
tgtcccctcacactggacatcaacacggcacacagagacctctgtctgtccgaagggaac
aagaaggtgacacgtgagggcacaaaagacaaatatcctgatcatcctgacagatttgac
tgctgggaacaagttctctgcagagaggctctgactgggactcgctgttactgggaggtg
gagtgcagtggagacttcatggtgtttggagtcgcatataaaggactgagcaggaaagga
ctgggcgtggaatgcggccttggatacaacgacaggtcctggagtttgctgcagtatcct
tcccagtactttgtgtatcacaataacaaggagactgaaatcatcgccccctacagcccc
agaataggtgtgtatctggactggcctgctggctctctgtcattttatagcgtctcacac
acaatgaccctcctgcacaccttctactcctccttcactgagcccctctatccagggttt
tatcttggtaataactccagtgcaacaatcagccatctgacaccaggtgaccgctga
DBGET
integrated database retrieval system
